Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_028837.1 Length=41149 Score E Sequences producing significant alignments: (Bits) Value seq6342 125 2e-24 >seq6342 Length=1134 Score = 125 bits (138), Expect = 2e-24 Identities = 169/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 20887 TGTTATACCAATTTATGTAATCATTGAGCTCCAATATTAGATGCTGTAAACTTTGAAAGT 20946 ||||||| ||||| ||||||||| | || ||| ||| || ||| | ||| | Sbjct 374 TGTTATATCAATTGATGTAATCAAATAATTCTAATTTTAATTGGATTAATGATGTAAAAT 433 Query 20947 TCATCTAACTAATGAATTCGGTCTTCATAACTTTAAACGCAGCTTCAGCAACGGCGTTAT 21006 | | | | |||| ||||| ||||| | | ||| || | ||||||||||| || |||| Sbjct 434 TTTTATCATTAATAAATTCTGTCTTAAAAGTTTTGAAAGTTGCTTCAGCAACAGCATTAT 493 Query 21007 CATAAGGACAACCTTTCATACTTAAAGATCGACCAATCTGGAACG-TAGCAAGCGTCTCA 21065 |||||||||||||||| |||||||||| || ||| | ||| | || || || | | Sbjct 494 CATAAGGACAACCTTTTTTACTTAAAGAGCGTGTAATGTTGAATGCTAATAAAAGT-TGA 552 Query 21066 TCAATCAATTTATTTTTGAATTCACTGCCACGATCTGTATGAAACAATTGAAT 21118 | ||||| |||||| ||||||||| | || ||||| ||||||| | ||| || Sbjct 553 TTAATCATTTTATTATTGAATTCATTACCGCGATCACTATGAAATATTTGGAT 605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131544144183214