Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq569 96.9 2e-15
seq241 95.1 9e-15
>seq569
Length=200630
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
|||||||||||| |||||||| || || || ||| || || | || || ||| | |
Sbjct 134392 AATGCAAATTTTCGTGAAAACCCTAACCGGTAAAACCATCACCCTCGAGGTTGAACCCTC 134451
Query 27849 CG--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906
|| || || | ||| ||||| |||||| ||||| || ||| | || ||
Sbjct 134452 CGATACCATCGAAAAT--GTCAAGGCAAAAATCCAAGACAAGGAGGGTATCCCACCAGAT 134509
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966
|| ||||| ||||| || || || |||||| |||| || | ||||| | ||||| |||
Sbjct 134510 CAACAACGTTTAATCTTCGCTGGTAAACAACTGGAAGATGGACGCACTCTTTCCGACTAC 134569
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017
||||| ||||| || || | || ||||| |||||| | ||||| |||
Sbjct 134570 AACATTCAAAAGGAATCGACGCTTCACTTGGTGTTGCGTCTTCGTGGTGGC 134620
>seq241
Length=949647
Score = 95.1 bits (104), Expect = 9e-15
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
|||||| || ||||| ||||| | ||||| ||| |||||| | || || || |
Sbjct 166049 AATGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATC 166108
Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906
|| | || | ||| || ||| ||||| || |||||||| |||| ||
Sbjct 166109 TGATACCATTGAAAAT--GTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGAT 166166
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966
|| ||||| ||||| ||||| || |||||||| || |||| ||||| | || ||||||
Sbjct 166167 CAACAACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTAC 166226
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||||||| || | |||||||| ||| | ||| | || ||
Sbjct 166227 AACATCCAAAAAGAATCAACCCTCCATTTGGTGTTGAGATTGAGAGGAGG 166276
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| ||||| |||||||| | ||||| ||| || || | || ||||| |
Sbjct 165594 ATGCAGATTTTCGTGAAAACCTTGACTGGTAAAACCATCACGTTAGAGGTCGAGCCATCT 165653
Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909
||| | | || || || ||||| |||||||| || | || || ||
Sbjct 165654 GACACTATTGAAAATGTGAAGGCGAAAATCCAGGACAAAGAGGGGATCCCACCAGACCAA 165713
Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969
|||||||| || ||||||||||||||||| || || | ||| | | | |||||||||||
Sbjct 165714 CAACGGTTGATCTTTGCCGGAAAACAATTAGAAGATGGACGTACCCTTTCCGATTACAAT 165773
Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||| || ||| | || ||||| ||| | ||| | || ||
Sbjct 165774 ATCCAAAAGGAATCAACTCTCCACTTGGTATTGAGATTGAGGGGTGG 165820
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
||||||||||||||| || || | ||||| ||| || ||| | || |||||| |
Sbjct 166505 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCTTC 166564
Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908
|| | | || || ||| ||||| || |||||||| | || || ||
Sbjct 166565 TGATACTATTGAAAACGTTAAAGCTAAAATCCAGGATAAAGAAGGGATCCCACCAGACCA 166624
Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968
||||| ||||| || ||||| |||||| | || || | ||| | | || ||||| ||
Sbjct 166625 ACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGACGTACTCTTTCGGATTATAA 166684
Query 27969 CATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||||| ||| | ||||| || ||| | ||||| || ||
Sbjct 166685 CATCCAAAAAGAATCCACCCTCCATTTAGTGTTGAGATTGCGAGGTGG 166732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355831706534379
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |