Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq241 147 5e-30
seq569 145 2e-29
seq412 127 5e-24
>seq241
Length=949647
Score = 147 bits (162), Expect = 5e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || ||||| |||||||||||||||||||||| ||| || | ||||||||| || ||
Sbjct 166708 TGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAAAGAGTACGTCCATCTTCAAGTTGT 166649
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || |||||||| | ||||||||||| || || | ||||| || |||||||| ||
Sbjct 166648 TTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGGATCCCTTCTTTATCCTGGATTTTA 166589
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||| |||||||| || || ||||| ||| || || | ||||| || || || ||
Sbjct 166588 GCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACTTCCAATGTGATGGTTTTACCAGTT 166529
Query 211092 AGAGTCTTTACAAACACCTGCATT 211115
| ||||| ||||| | ||||||
Sbjct 166528 AAGGTCTTAACAAAAATTTGCATT 166505
Score = 136 bits (150), Expect = 9e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| ||||| || |||||||||||||| || || | ||| || | |||||||| || ||
Sbjct 166936 TGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTACGCCCATCTTCAAGTTGT 166877
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || ||||| | |||||||| || ||||||| |||||| || |||||||||||
Sbjct 166876 TTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCTTTATCCTGGATCTTA 166817
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||| || ||||| || || ||||| |||||| || | ||||| || || || ||
Sbjct 166816 GCTTTAACATTTTCAATTGTATCAGAAGGTTCAACTTCCAAGGTGATGGTTTTACCGGTT 166757
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
| ||||| ||||| | |||||
Sbjct 166756 AAGGTCTTAACAAAAATTTGCAT 166734
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|||||||| || || |||||||| || ||||| | ||| || | ||||||||||| ||
Sbjct 166024 TGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAAAGAGTACGTCCATCTTCCAATTGT 165965
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || ||||| | |||||||| || || || | ||||||||| || || |||||
Sbjct 165964 TTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCTTGAATCTTA 165905
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||| || ||||| |||||||| || ||||| || | || || |||||||| ||
Sbjct 165904 GCTTTAACATTTTCTATGGTGTCGGATGGCTCAACTTCCAATGTAATAGTCTTTCCAGTC 165845
Query 211092 AGAGTCTTTACAAACACCTGCATT 211115
| ||| || || || | |||||||
Sbjct 165844 AAAGTTTTGACGAAGATCTGCATT 165821
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || || || |||||||||||||| ||||| | ||| || | ||| ||||| | ||
Sbjct 166252 TGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCTTCTAATTGT 166193
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || ||||| | |||||||| || ||||||| |||||| || |||||||| ||
Sbjct 166192 TTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGAATTCCTTCTTTATCCTGGATTTTA 166133
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||| || ||||| ||||| ||||| ||||| || | ||| || || ||||| ||
Sbjct 166132 GCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCCAAAGTAATAGTTTTTCCAGTC 166073
Query 211092 AGAGTCTTTACAAACACCTGCATT 211115
| || || ||||| | |||||||
Sbjct 166072 AATGTTTTGACAAAGATCTGCATT 166049
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || || || |||||||||||||| ||||| | ||| || | |||||||| || ||
Sbjct 167392 TGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTGT 167333
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || |||||||| | |||||||| || || || | |||||||||||| ||||| ||
Sbjct 167332 TTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTA 167273
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||| || || || ||||| ||||| ||||| || | || || || ||||| ||
Sbjct 167272 GCTTTAACATTCTCAATGGTATCAGATGGCTCAACTTCCAATGTAATAGTTTTTCCAGTC 167213
Query 211092 AGAGTCTTTACAAACACCTGCATT 211115
| ||| || ||||| | |||||||
Sbjct 167212 AAAGTTTTGACAAAGATCTGCATT 167189
Score = 129 bits (142), Expect = 1e-24
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || || || |||||||| ||||| ||||| | ||| || | |||||||| | ||
Sbjct 167620 TGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTGT 167561
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || |||||||| | |||||||| || || || | |||||||||||| ||||| ||
Sbjct 167560 TTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTA 167501
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||| || ||||| ||||| ||||| ||| || || || ||||| || ||||| ||
Sbjct 167500 GCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTTCTAGGGTGATGGTTTTTCCAGTT 167441
Query 211092 AGAGTCTTTACAAACACCTGCATT 211115
| || ||||| || | ||||||
Sbjct 167440 AATGTTTTTACGAAGATTTGCATT 167417
Score = 129 bits (142), Expect = 1e-24
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| |||||||| || |||||||| || ||||| | |||||| | ||||||||||| ||
Sbjct 167848 TGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAAAGGGTACGTCCATCTTCCAATTGT 167789
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || ||||| || | || ||||| || || || | |||||||||||| ||||| ||
Sbjct 167788 TTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTA 167729
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||| || ||||| || || ||||| ||| || || | ||||| || ||||| ||
Sbjct 167728 GCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAAGGTGATGGTTTTTCCAGTT 167669
Query 211092 AGAGTCTTTACAAACACCTGCATT 211115
| || ||||| || | ||||||
Sbjct 167668 AATGTTTTTACGAAGATTTGCATT 167645
Score = 120 bits (132), Expect = 7e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| ||||| || || |||||||| || ||||| | |||||| | ||||||||| | ||
Sbjct 165797 GTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGAAAGGGTACGTCCATCTTCTAATTG 165738
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || || ||||| | ||||||||||| || || | || || ||||||||||| ||
Sbjct 165737 TTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGGGATCCCCTCTTTGTCCTGGATTTT 165678
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||||| ||||| || |||||||| || ||||| | ||||| || || || ||
Sbjct 165677 CGCCTTCACATTTTCAATAGTGTCAGATGGCTCGACCTCTAACGTGATGGTTTTACCAGT 165618
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| || || || || | ||||||
Sbjct 165617 CAAGGTTTTCACGAAAATCTGCAT 165594
>seq569
Length=200630
Score = 145 bits (160), Expect = 2e-29
Identities = 166/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | || | |||||| || || || ||||| ||||| || || | ||| ||
Sbjct 134614 ACGAAGACGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGT 134555
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||||||| || || || |||||||| | |||||||| || || || | ||
Sbjct 134554 GCGTCCATCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACC 134495
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| ||||| ||| || || ||||||||||| || ||| ||||||||||||
Sbjct 134494 CTCCTTGTCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAG 134435
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||| || || || || || || || || || | ||||||
Sbjct 134434 GGTGATGGTTTTACCGGTTAGGGTTTTCACGAAAATTTGCATT 134392
>seq412
Length=275653
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| | ||||||||| | || | || || ||||| || || |||||||| | ||| ||
Sbjct 83010 ACGCAATCTTAGGACTAAATGCAACGTTGATTCTTTCTGAATATTATAATCAGAAAGAGT 82951
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||| || || || || ||||| || | || ||||| || || || | |||
Sbjct 82950 GCGCCCATCTTCGAGTTGTTTTCCCGCGAAAATTAAACGCTGTTGATCCGGTGGGATTCC 82891
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|| ||||| |||||||| || || ||||||||||| || || || ||||| ||
Sbjct 82890 CTCTTTGTCTTGGATCTTAGCCTTGACATTTTCGATGGTATCGGAAGGCTCGACCTCAAG 82831
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT-TTTATGG 211121
||| || ||||| || || | ||| || ||||| | |||||| ||| |||
Sbjct 82830 AGTTATGGTCTTGCCAGTTAAAGTTTTAACAAAGATCTGCATATTTGTGG 82781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159046894979105
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