Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq241 147 5e-30 seq569 145 2e-29 seq412 127 5e-24 >seq241 Length=949647 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || ||||| |||||||||||||||||||||| ||| || | ||||||||| || || Sbjct 166708 TGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAAAGAGTACGTCCATCTTCAAGTTGT 166649 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || |||||||| | ||||||||||| || || | ||||| || |||||||| || Sbjct 166648 TTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGGATCCCTTCTTTATCCTGGATTTTA 166589 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| |||||||| || || ||||| ||| || || | ||||| || || || || Sbjct 166588 GCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACTTCCAATGTGATGGTTTTACCAGTT 166529 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 | ||||| ||||| | |||||| Sbjct 166528 AAGGTCTTAACAAAAATTTGCATT 166505 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || ||||| || |||||||||||||| || || | ||| || | |||||||| || || Sbjct 166936 TGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTACGCCCATCTTCAAGTTGT 166877 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || ||||| | |||||||| || ||||||| |||||| || ||||||||||| Sbjct 166876 TTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCTTTATCCTGGATCTTA 166817 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || ||||| || || ||||| |||||| || | ||||| || || || || Sbjct 166816 GCTTTAACATTTTCAATTGTATCAGAAGGTTCAACTTCCAAGGTGATGGTTTTACCGGTT 166757 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| | ||||| Sbjct 166756 AAGGTCTTAACAAAAATTTGCAT 166734 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 |||||||| || || |||||||| || ||||| | ||| || | ||||||||||| || Sbjct 166024 TGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAAAGAGTACGTCCATCTTCCAATTGT 165965 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || ||||| | |||||||| || || || | ||||||||| || || ||||| Sbjct 165964 TTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCTTGAATCTTA 165905 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || ||||| |||||||| || ||||| || | || || |||||||| || Sbjct 165904 GCTTTAACATTTTCTATGGTGTCGGATGGCTCAACTTCCAATGTAATAGTCTTTCCAGTC 165845 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 | ||| || || || | ||||||| Sbjct 165844 AAAGTTTTGACGAAGATCTGCATT 165821 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || || || |||||||||||||| ||||| | ||| || | ||| ||||| | || Sbjct 166252 TGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCTTCTAATTGT 166193 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || ||||| | |||||||| || ||||||| |||||| || |||||||| || Sbjct 166192 TTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGAATTCCTTCTTTATCCTGGATTTTA 166133 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || ||||| ||||| ||||| ||||| || | ||| || || ||||| || Sbjct 166132 GCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCCAAAGTAATAGTTTTTCCAGTC 166073 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 | || || ||||| | ||||||| Sbjct 166072 AATGTTTTGACAAAGATCTGCATT 166049 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || || || |||||||||||||| ||||| | ||| || | |||||||| || || Sbjct 167392 TGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTGT 167333 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || |||||||| | |||||||| || || || | |||||||||||| ||||| || Sbjct 167332 TTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTA 167273 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || || || ||||| ||||| ||||| || | || || || ||||| || Sbjct 167272 GCTTTAACATTCTCAATGGTATCAGATGGCTCAACTTCCAATGTAATAGTTTTTCCAGTC 167213 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 | ||| || ||||| | ||||||| Sbjct 167212 AAAGTTTTGACAAAGATCTGCATT 167189 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || || || |||||||| ||||| ||||| | ||| || | |||||||| | || Sbjct 167620 TGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTGT 167561 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || |||||||| | |||||||| || || || | |||||||||||| ||||| || Sbjct 167560 TTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTA 167501 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || ||||| ||||| ||||| ||| || || || ||||| || ||||| || Sbjct 167500 GCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTTCTAGGGTGATGGTTTTTCCAGTT 167441 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 | || ||||| || | |||||| Sbjct 167440 AATGTTTTTACGAAGATTTGCATT 167417 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || |||||||| || |||||||| || ||||| | |||||| | ||||||||||| || Sbjct 167848 TGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAAAGGGTACGTCCATCTTCCAATTGT 167789 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || ||||| || | || ||||| || || || | |||||||||||| ||||| || Sbjct 167788 TTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTTA 167729 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || ||||| || || ||||| ||| || || | ||||| || ||||| || Sbjct 167728 GCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAAGGTGATGGTTTTTCCAGTT 167669 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 | || ||||| || | |||||| Sbjct 167668 AATGTTTTTACGAAGATTTGCATT 167645 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| ||||| || || |||||||| || ||||| | |||||| | ||||||||| | || Sbjct 165797 GTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGAAAGGGTACGTCCATCTTCTAATTG 165738 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || || ||||| | ||||||||||| || || | || || ||||||||||| || Sbjct 165737 TTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGGGATCCCCTCTTTGTCCTGGATTTT 165678 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||||| ||||| || |||||||| || ||||| | ||||| || || || || Sbjct 165677 CGCCTTCACATTTTCAATAGTGTCAGATGGCTCGACCTCTAACGTGATGGTTTTACCAGT 165618 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | || || || || | |||||| Sbjct 165617 CAAGGTTTTCACGAAAATCTGCAT 165594 >seq569 Length=200630 Score = 145 bits (160), Expect = 2e-29 Identities = 166/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | | || | |||||| || || || ||||| ||||| || || | ||| || Sbjct 134614 ACGAAGACGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGT 134555 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||||| || || || |||||||| | |||||||| || || || | || Sbjct 134554 GCGTCCATCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACC 134495 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| ||||| ||| || || ||||||||||| || ||| |||||||||||| Sbjct 134494 CTCCTTGTCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAG 134435 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || || || || || || || || | |||||| Sbjct 134434 GGTGATGGTTTTACCGGTTAGGGTTTTCACGAAAATTTGCATT 134392 >seq412 Length=275653 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| | ||||||||| | || | || || ||||| || || |||||||| | ||| || Sbjct 83010 ACGCAATCTTAGGACTAAATGCAACGTTGATTCTTTCTGAATATTATAATCAGAAAGAGT 82951 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || || || || ||||| || | || ||||| || || || | ||| Sbjct 82950 GCGCCCATCTTCGAGTTGTTTTCCCGCGAAAATTAAACGCTGTTGATCCGGTGGGATTCC 82891 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || ||||| |||||||| || || ||||||||||| || || || ||||| || Sbjct 82890 CTCTTTGTCTTGGATCTTAGCCTTGACATTTTCGATGGTATCGGAAGGCTCGACCTCAAG 82831 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT-TTTATGG 211121 ||| || ||||| || || | ||| || ||||| | |||||| ||| ||| Sbjct 82830 AGTTATGGTCTTGCCAGTTAAAGTTTTAACAAAGATCTGCATATTTGTGG 82781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159046894979105