Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq241 98.7 9e-16 >seq241 Length=949647 Score = 98.7 bits (108), Expect = 9e-16 Identities = 170/246 (69%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 39039 TAACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTT 39098 |||| ||||||| || |||||||| || | ||||||||||| || || ||||| Sbjct 166293 TAACAAAAATTTG--CATTCCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTT 166236 Query 39099 TTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAG 39158 ||| || || ||||| | ||| || ||| |||| || | ||||| || ||||| || | Sbjct 166235 TTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAA 166176 Query 39159 ACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCAC 39218 || || || || | || | | ||||| ||| |||||| ||| | | | | Sbjct 166175 TCGTTGTTGATCTGGAGGAATTCCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCAAT 166116 Query 39219 CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGAT 39278 ||||| | ||| || |||| || ||| ||||||| |||| ||||| |||||||| Sbjct 166115 GGTATCAGATGGCTCAACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGAT 166056 Query 39279 TTGCAT 39284 ||||| Sbjct 166055 CTGCAT 166050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429508551289301