Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq241 98.7 9e-16
>seq241
Length=949647
Score = 98.7 bits (108), Expect = 9e-16
Identities = 170/246 (69%), Gaps = 2/246 (1%)
Strand=Plus/Minus
Query 39039 TAACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTT 39098
|||| ||||||| || |||||||| || | ||||||||||| || || |||||
Sbjct 166293 TAACAAAAATTTG--CATTCCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTT 166236
Query 39099 TTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAG 39158
||| || || ||||| | ||| || ||| |||| || | ||||| || ||||| || |
Sbjct 166235 TTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAA 166176
Query 39159 ACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCAC 39218
|| || || || | || | | ||||| ||| |||||| ||| | | | |
Sbjct 166175 TCGTTGTTGATCTGGAGGAATTCCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCAAT 166116
Query 39219 CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGAT 39278
||||| | ||| || |||| || ||| ||||||| |||| ||||| ||||||||
Sbjct 166115 GGTATCAGATGGCTCAACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGAT 166056
Query 39279 TTGCAT 39284
|||||
Sbjct 166055 CTGCAT 166050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429508551289301
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |