Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq241 150 1e-31
seq569 141 6e-29
seq412 109 4e-19
>seq241
Length=949647
Score = 150 bits (166), Expect = 1e-31
Identities = 173/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| || || ||||| | || |||||||| || ||| | |||||||| | |
Sbjct 166049 AATGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATC 166108
Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || |||||| | ||||| | |||| | || |||||||| | || |||||||
Sbjct 166109 TGATACCATTGAAAATGTTAAAGCTAAAA-TCCAGGATAAAGAAGGAATTCCTCCAGATC 166167
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| || ||||| ||||| || |||||| | ||||||| ||||||| | |||||||
Sbjct 166168 AACAACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACA 166227
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|||| |||||||| || || | ||||| || || || ||| ||||||||
Sbjct 166228 ACATCCAAAAAGAATCAACCCTCCATTTGGTGTTGAGATTGAGAGGAGGA 166277
Score = 141 bits (156), Expect = 6e-29
Identities = 171/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || ||||| ||||| | || |||||||| ||||| || ||||| || | |
Sbjct 167417 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTC 167476
Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || |||||| | ||||| | |||| | ||||| ||||| | || |||||||
Sbjct 167477 TGATACCATTGAAAATGTTAAAGCTAAAA-TCCAAGACAAGGAAGGAATCCCACCAGATC 167535
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| |||||||| || ||||| |||||| | ||||| | || ||| | |||||||
Sbjct 167536 AACAACGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACA 167595
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|||| |||||||| || || | |||||||| || ||||| |||| |||
Sbjct 167596 ACATTCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGGA 167645
Score = 138 bits (152), Expect = 8e-28
Identities = 170/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| ||||| ||||| ||| | || || ||||| ||||| | ||||| || | |
Sbjct 166277 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCATC 166336
Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| |||||| | ||||| | || | | || || ||||| | || |||||||
Sbjct 166337 CGACACCATTGAAAATGTTAAAGCTAAGA-TCCAAGATAAGGAAGGAATCCCACCAGATC 166395
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| || ||||| ||||| || |||||| | ||||| | |||||| | |||||||
Sbjct 166396 AACAACGATTAATCTTTGCTGGTAAACAATTAGAAGATGGGCGCACTCTTTCTGATTACA 166455
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|||| || ||||| ||||| | |||||||| || || ||| ||||||||
Sbjct 166456 ACATCCAGAAAGAATCCACCCTTCATTTAGTATTGAGATTGAGAGGAGGA 166505
Score = 138 bits (152), Expect = 8e-28
Identities = 170/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| || || ||||| | || |||||||| || || | |||||||| | |
Sbjct 167189 AATGCAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATC 167248
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || |||| ||| ||||| | |||| | ||||| ||||| | || |||||||
Sbjct 167249 TGATACCATTGAGAATGTTAAAGCTAAAA-TCCAAGACAAGGAAGGAATCCCACCAGATC 167307
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| ||||| || || ||||| |||||||| ||||| | || ||| | |||||||
Sbjct 167308 AACAACGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACA 167367
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|||| |||||||| || || | |||||||| || ||||| |||| |||
Sbjct 167368 ACATCCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGGA 167417
Score = 136 bits (150), Expect = 3e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| ||||| ||||| ||| | || || ||||| ||||| | |||||||| | |
Sbjct 166734 ATGCAAATTTTTGTTAAGACCTTAACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCT 166793
Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||||| | ||||| | || | | || |||||||| | || ||||||||
Sbjct 166794 GATACAATTGAAAATGTTAAAGCTAAGA-TCCAGGATAAAGAAGGAATTCCTCCAGATCA 166852
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| |||||||| ||||| || |||||||| ||||| | || ||| | || |||||
Sbjct 166853 ACAACGTTTAATCTTTGCTGGTAAACAACTTGAAGATGGGCGTACTCTTTCTGACTACAA 166912
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
||| |||||||| || || | |||||||| || || ||| |||| |||
Sbjct 166913 CATCCAAAAAGAATCAACTCTCCATTTAGTATTGAGATTGAGAGGTGGA 166961
Score = 132 bits (146), Expect = 3e-26
Identities = 169/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||| || ||||| | || |||||||| || ||| | |||||||| | |
Sbjct 166961 AATGCAGATTTTTGTCAAAACTTTGACTGGAAAAACTATTACTTTAGAAGTTGAGCCATC 167020
Query 23670 GGACACTGTTG-AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || ||| |||| ||||| | ||||| || || ||||| | || |||||||
Sbjct 167021 TGATACCATTGAAAATGTTAAAGC-TAAAATCCAGGATAAGGAAGGAATTCCTCCAGATC 167079
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| |||||||| || ||||| |||||||| ||||| | |||||| | |||||||
Sbjct 167080 AACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGGCGCACTCTTTCTGATTACA 167139
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
| || ||||| || || || | || || || || || ||| |||| |||
Sbjct 167140 ATATCCAAAAGGAATCTACTCTCCACTTGGTATTGAGATTGAGAGGTGGA 167189
Score = 127 bits (140), Expect = 1e-24
Identities = 157/212 (74%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || ||||| ||||| | || |||||||| ||||| | ||||| || | |
Sbjct 167645 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTC 167704
Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| ||| |||||| | ||||| | |||| | ||||| ||||| | || |||||||
Sbjct 167705 TGATACTATTGAAAATGTTAAAGCTAAAA-TCCAAGACAAGGAAGGAATCCCACCAGATC 167763
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||||||||| || || || || |||||| ||||||| | ||| || | |||||||
Sbjct 167764 AACAGCGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTACA 167823
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820
| || ||||| || ||||| | |||||||||
Sbjct 167824 ATATCCAAAAGGAATCCACTCTGCATTTAGTT 167855
Score = 123 bits (136), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| ||||| ||||| | || ||||| || || || | |||||||| | |
Sbjct 165821 AATGCAGATCTTCGTCAAAACTTTGACTGGAAAGACTATTACATTGGAAGTTGAGCCATC 165880
Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| | |||| | ||||| | || | || || || ||||| | || |||||||
Sbjct 165881 CGACACCATAGAAAATGTTAAAGCTAAGA-TTCAAGATAAGGAAGGAATCCCACCAGATC 165939
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| ||||| || ||||| || |||||| ||||||| | ||| ||| | |||||||
Sbjct 165940 AACAACGTTTGATCTTTGCTGGAAAACAATTGGAAGATGGACGTACTCTTTCTGATTACA 165999
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
| || ||||| || || || | ||||| || || || ||| |||| |||
Sbjct 166000 ATATCCAAAAGGAATCAACTCTTCATTTGGTATTGAGATTGAGAGGTGGA 166049
Score = 114 bits (126), Expect = 9e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| |||||| | || || ||||| ||||| | || || || | |
Sbjct 165594 ATGCAGATTTTCGTGAAAACCTTGACTGGTAAAACCATCACGTTAGAGGTCGAGCCATCT 165653
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| |||||| | || ||||| |||||||| || | || ||||| |||
Sbjct 165654 GACACTATTGAAAATGTGAAGGCGAAAATCCAGGACAAAGAGGGGATCCCACCAGACCAA 165713
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| || || || |||||||| |||||| | ||||| | ||| || | |||||||||
Sbjct 165714 CAACGGTTGATCTTTGCCGGAAAACAATTAGAAGATGGACGTACCCTTTCCGATTACAAT 165773
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|| ||||| || || || | || || || || || ||| | || |||
Sbjct 165774 ATCCAAAAGGAATCAACTCTCCACTTGGTATTGAGATTGAGGGGTGGA 165821
>seq569
Length=200630
Score = 141 bits (156), Expect = 6e-29
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| |||||||| |||||||| || || ||||| ||||| ||||| ||||| || |
Sbjct 134392 AATGCAAATTTTCGTGAAAACCCTAACCGGTAAAACCATCACCCTCGAGGTTGAACCCTC 134451
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | |||| | || |||||| ||||| || ||| | || ||||||||
Sbjct 134452 CGATACCATCGAAAATGTCAAGGCAAAAATCCAAGACAAGGAGGGTATCCCACCAGATCA 134511
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| |||||||| || || || |||||||||||||| | ||||||| | ||| |||||
Sbjct 134512 ACAACGTTTAATCTTCGCTGGTAAACAACTGGAAGATGGACGCACTCTTTCCGACTACAA 134571
Query 23790 CATACAAAAAGAGTCCAC 23807
||| ||||| || || ||
Sbjct 134572 CATTCAAAAGGAATCGAC 134589
>seq412
Length=275653
Score = 109 bits (120), Expect = 4e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| || |||||||| | || || || || || ||||| || || || |
Sbjct 82786 AATATGCAGATCTTTGTTAAAACTTTAACTGGCAAGACCATAACTCTTGAGGTCGAGCCT 82845
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| || || | |||| | || || || |||||||| || | || || |||
Sbjct 82846 TCCGATACCATCGAAAATGTCAAGGCTAAGATCCAAGACAAAGAGGGAATCCCACCGGAT 82905
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|||||||||||||| || || || |||||||| ||||| | |||||| | |||||
Sbjct 82906 CAACAGCGTTTAATTTTCGCGGGAAAACAACTCGAAGATGGGCGCACTCTTTCTGATTAT 82965
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| || || ||||| || || || |||||||| |||| ||||| || ||
Sbjct 82966 AATATTCAGAAAGAATCAACGTTGCATTTAGTCCTAAGATTGCGTGGTGG 83015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337980446355116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |