Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq1159 435 3e-117
>seq1159
Length=103958
Score = 435 bits (482), Expect = 3e-117
Identities = 628/878 (72%), Gaps = 6/878 (1%)
Strand=Plus/Plus
Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306
||||||| ||||||||| || || || || ||||||||||| || ||
Sbjct 49822 AACACCAGCTTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATC 49881
Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366
|| ||| | |||||||||||| |||||||||| ||||| ||||||||| ||
Sbjct 49882 AGATATAAGATTCATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACAACCAAG 49941
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
| | || || || || ||||| || || ||||| ||| | | ||| || ||
Sbjct 49942 TTCAGTTAATAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCAT 50001
Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486
|| ||||| || || || || || | || ||||| || ||||| || || || ||
Sbjct 50002 CCCGATTAAACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCATC 50061
Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAG-TATCCAAACAATA 4545
|| ||| |||| || || || || || || | |||| ||| ||||||||
Sbjct 50062 GCGAATAATACTCGTTATACGTTCCTTTGACGGCTT-TTGAATAAGATATGTAAACAATA 50120
Query 4546 AACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTA 4605
|||| ||||| || |||| |||||||| || | ||| | ||| |||||||||||||
Sbjct 50121 AACAAGCAAATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGTTA 50180
Query 4606 ATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGA 4665
| |||||||||||||| | |||||| | |||||| ||||| ||||| || |||||||
Sbjct 50181 AACCGGGCATTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAAGA 50240
Query 4666 ATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTT 4725
| || || || ||||| ||||| || ||||| || ||| || | | | ||| ||
Sbjct 50241 AAATACCCTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGT-CGCGTTTTTACTA 50299
Query 4726 -TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784
||||||| ||||| ||||| | |||||| || ||||| || |||| || | || |||
Sbjct 50300 CTAATCCAATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGCG 50359
Query 4785 TTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATAC 4844
|||||||| ||||| ||| || ||||||||| || |||| | ||| |||
Sbjct 50360 TTAAATAAAAATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTAC 50419
Query 4845 ATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTT 4904
|||||||| || |||||||| |||||||| ||||| |||||||| || | ||||| |||
Sbjct 50420 ATTTCAGAGTGAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGTT 50479
Query 4905 ACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCT 4964
|| |||||||| | || ||| | ||| ||||| ||||||||||| || || ||| ||
Sbjct 50480 ACCTGAACTTCTTGACTAAAACGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGCA 50539
Query 4965 GCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCA-GGCTTAAGTTTTTTCCA 5023
|||||||| || |||||||| || ||||| | |||||| | | |||| | ||| |||
Sbjct 50540 GCAAAAAAGGCTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAA-TGTTTGCCA 50598
Query 5024 GTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTT 5083
|| | |||||| | | ||| ||||||||| |||||||| || |||||||| |
Sbjct 50599 ATGATTGAGATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAATGAAGCTTCCGCCTG 50658
Query 5084 TTTGTACATAGACCAAATATCAGGATACTGAATCGGAA 5121
|||||| | | ||||||||||||||||| ||| ||||
Sbjct 50659 TTTGTATTTCGCCCAAATATCAGGATACTCAATGGGAA 50696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427012766571641
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |