Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1284 713 0.0 seq1159 361 8e-95 >seq1284 Length=72753 Score = 713 bits (790), Expect = 0.0 Identities = 1312/1905 (69%), Gaps = 51/1905 (3%) Strand=Plus/Minus Query 76762 TTATTTTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGAT 76821 ||| ||| | ||||| | || || ||||| || || ||||||||| || | || || Sbjct 54625 TTAATTTGCTTTTATCGACGGTGAATTGAATGGGTTGAGCTGCGGGTTTCGTTCTTAAAT 54566 Query 76822 AGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGG 76881 | ||||| || ||||| || || | | ||| ||||| ||||| || ||| | || Sbjct 54565 AATACATTCCTGTTTTAAGTCCTTGTCGCCAGCCGTAAAAATGAATTGATGTTAAAACGG 54506 Query 76882 AATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTC 76941 | ||| | || | ||||| | || ||| | || || ||||||||||||||||| |||| Sbjct 54505 AGTAAGTCGGTTTGGCTACGTAAAGATTTAAAGATTGGCTTTGATCGATGAAAGCCCCTC 54446 Query 76942 TATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTT 77001 | | || || ||||| ||| || | | ||||||||||| ||||| ||| || Sbjct 54445 GAGCCGCGGCTTGATTTATGATGCATTTATTTGAAATTTCCCAAACTGTTTTATAAATTT 54386 Query 77002 GTTTGATATCATCTGGAAGGTTTG-----TATTTTGAATGGAACCACCATCTGATATAAT 77056 ||| | ||| || || | |||| | |||||||| || || | || || || || Sbjct 54385 CTTTTAAATCGTCAGGGA--TTTGGGGGATGTTTTGAATTGAGCCGCGATTTGCAATTAT 54328 Query 77057 TGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGG 77116 | ||| || || ||||| ||| | ||| || |||||| |||| | | || | Sbjct 54327 TTGATTTTTCATTAAATCATCCCAAAGCCCCCTTTCGGTTAAATCTCTTAATAAGTGGTG 54268 Query 77117 ATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGG 77176 |||||| | ||| || || ||||| | |||||| || || |||||||| || || || Sbjct 54267 ATTAACAACTTGGAAATCCCCAGAAAGTACTCTTCGCGTATAAATATTCGATGTGTAAGG 54208 Query 77177 TTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCAC 77236 ||| | |||||| || ||||| | ||||||||| || ||||| |||||||| || || | Sbjct 54207 TTCAAAAGATTCGTTATTTCCTAGAATTTGAGCTGTTGAAGCTGTTGGCATTGGGGCTAA 54148 Query 77237 CAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 77296 | |||| |||||| | || ||| | | ||||| ||||||| | |||||||||||| Sbjct 54147 GAGTAAAGAATTTCTTATTCCGTGTTTATTAATTTTTTCTTTTAATTCTTTCCAATCCCA 54088 Query 77297 AAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGA 77356 | ||| || || ||||| ||| | ||||||||| | ||||| |||||| || || Sbjct 54087 TAAATCAGATGGAGTAACATTCCACATATCGTATTGCAAGATTCCTTTACTAACAGGGGA 54028 Query 77357 TCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGC 77416 || | || ||||||||| || ||| |||| |||| ||||||||| ||||| || || Sbjct 54027 ACCTTGGTAAGTTTCATAAACCCCGTCTTTTTCGGCTAATTCACAACTAGCTTCTAAGGC 53968 Query 77417 TCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAA 77476 |||||||||| ||||| || || | | || | | || ||||| |||||||| Sbjct 53967 ACCGTAATAAAGCGTTTCAAAGATTTGCACGTTTAATTTATGGGCTTCGGGGCTATCAAA 53908 Query 77477 CGGATAATGT-AAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTC 77535 || | | | | | |||||| |||||||||||||| |||| ||||| ||||| || | Sbjct 53907 -GGGGAGTCTCATCAAAATAAAAGCATCTGCTAATCCTTGAATACCAATTCCAATGGGGC 53849 Query 77536 TATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTT 77595 ||| | |||||||| ||| ||||||||| | || |||||||||| || |||| || Sbjct 53848 GATGGCGTTTATTGGACGTTTCAGCTTCTGGGAGTGGGTAATAATTAACATCGATAACTT 53789 Query 77596 TATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTT- 77654 |||| | |||| | || ||||| ||| |||| ||| ||||||||| ||| Sbjct 53788 TATTTAAATTTTTTGTTACAACTTTTGTGACGATTTTTAATTTTTCAAAATCAAAACTTT 53729 Query 77655 --CCATC---TATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCT 77709 | || | |||| ||| ||| | || || ||||||| |||||||||||| | | Sbjct 53728 TCCTGTCGGGTTTAACGAACTGGTTAACCGCAATTGATGCTAAATTACAAACTGCGATTT 53669 Query 77710 CATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCA 77769 ||| || | |||| || || ||||| |||| ||| |||| ||| || || || | Sbjct 53668 CATCAGGAGATGTGTATTCAATGATTTCGGTGCATAAATTGCTACTTTTTATTGTACCTA 53609 Query 77770 GATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGG 77829 || ||||||||| || || ||| || | ||| ||||| | ||| | ||||| || | Sbjct 53608 AATGTTGTTGGTTACTTTTGCGATTACAAGCGTCTTTATACAACATATATGGAGTTCCAG 53549 Query 77830 TTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTAT------CATAG 77883 ||||||| || || | || || | |||||| | |||| || ||| | | Sbjct 53548 TTTCAATTTGAGACACAATTATGGCTTTCCATAATTCTCTGGCGGGTATTTGGCGAACAA 53489 Query 77884 ATTTGTATCGCCTCTCTCTTTCATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCA 77941 |||| | || | |||| || || ||||| || | |||| || ||||| Sbjct 53488 ATTTTT------TCCTTTTTTCGTAATTTTCGTATAATTCC--ACGAATTTTTCCCCCCA 53437 Query 77942 AACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT 78001 | |||| || || || |||| || || ||||| | ||||| |||||||| Sbjct 53436 ACAATCAGATAAACCGGGACATTGATGAGGACACATTAGCGACCACATTGAATCTTCCTC 53377 Query 78002 AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATG 78061 || ||||||||||| | |||||| ||||||| |||| ||||| ||||| | ||| Sbjct 53376 GACGCGTTTCATAAATAAATCAGGAATCCATAAAGCATAAAATAAATCTCTCGCCCTAAC 53317 Query 78062 TTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121 ||||||| || ||||| ||||| | || | ||| || | || ||| | |||||| || Sbjct 53316 TTCTTCAGCCCCAGTATTTTTTTTTAAATTTAAAAAATCAACAACATCCGCATGCCACGG 53257 Query 78122 TTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGC 78181 ||||| ||| ||||| | ||||||||| ||||||||| || ||||| | ||||| || Sbjct 53256 TTCTAAATAAATTGCAAACGCTCCAGGTCTTTTATTACCCCCTTGATCGACATATCGAGC 53197 Query 78182 GGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGA 78241 || |||||| |||| | |||||||| | | |||||| || | ||||| ||||||| Sbjct 53196 TGTATTATTAAAAACCCGTAACATTGGTACTAAACCGTTTGAAATACCATTAGTTCCAGC 53137 Query 78242 AATATAACTTCCACTTGCGCGAATATTACTAATGGA---TATC-CCTATTCCTCCTGCCA 78297 |||| | || ||| |||||||| ||||| || | || |||||||| || Sbjct 53136 AATAATCGTGCCTTGTGCTCGAATATT----ATGGACGTTAACTCCAATTCCTCCCGCAC 53081 Query 78298 TCTTAGATATTAGAGCGCAACGT---TTCAATGTATCGTAGATACCCTCTATACTGTCAT 78354 | || ||||| | ||| || || | || || | || || | || || | Sbjct 53080 TTTTTGATATAATAGCACATTGTGAGATACATTTA---AAAATGCCTTGGATTGAATCCT 53024 Query 78355 CCATCAT-GTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAAT 78413 || ||| ||| ||| ||||| |||||||| | || || |||| |||| Sbjct 53023 CCGGCATCATTACTAAG-AAACATGACGACATTTGTGGGCGAGGTGTCGCTGCGGCAAAT 52965 Query 78414 AATGTCGGAGATGCATGCGTAAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAGC 78472 || |||||| || || ||||| | || ||||| | ||| |||||| ||||||||||| Sbjct 52964 AAAGTCGGACTCGCGTGAGTAAAATACTTCTCAGACATGTA-ATTGTAAGTTTCAATAGC 52906 Query 78473 TGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTC 78531 |||||| ||||| || | ||||| || || || || ||||| |||||||| || || | Sbjct 52905 TGATTCAATGTCTTCACCG-TGAATCCCAACGGCCACGCGCATTAACATATGTTGGGGAC 52847 Query 78532 TTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAA 78591 |||| | | || || ||||| | | ||||| ||| | ||||||||||||| Sbjct 52846 GTTCAGCAATTTTTCCGTTGATTTTTAGGAGATATGAACGTTCGAGTGTTTTAAAACCAA 52787 Query 78592 AATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTA 78636 |||| || ||||| || || | |||||||| ||| |||||||| Sbjct 52786 AATAATTATATGAGAAATCACGATCGTAAATGATACAAGAATTTA 52742 Score = 96.9 bits (106), Expect = 5e-15 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 78747 AATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCA 78806 ||| |||| || ||||| || || ||||||| | ||| ||||| ||||| || | ||| Sbjct 43457 AATTGTTTCTTCGTTTCTTTATGGAGATTAGTCATAGCAATTCTAGCAGCAAGTGTTGCA 43398 Query 78807 TAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCT 78866 ||||||||||| | |||| | || || || |||| || ||||| | || ||||| Sbjct 43397 TAATCAGGATGGTCTGTAATTTTTGTAGCAGCGGTTTCAGCAGCTAAGGTGTCCAACTCA 43338 Query 78867 ATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGG 78909 | || || || || ||| || ||||||||||| ||||||| Sbjct 43337 ACTGTGGTAACGCCTGGATAAAGACCTTGAATAACCTTCATGG 43295 >seq1159 Length=103958 Score = 361 bits (400), Expect = 8e-95 Identities = 645/937 (69%), Gaps = 12/937 (1%) Strand=Plus/Plus Query 47824 TATCTTCTTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAAT 47883 |||| ||||||| ||| || |||||| || || || || |||||| || |||| Sbjct 49809 TATCATCTTGAGC---AACACCAGCTTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAAT 49865 Query 47884 TAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAA 47943 |||| || || |||||| | ||||||||||||||||||| || ||| || | Sbjct 49866 TAGTACGCCCATCATCAGATATAAGATTCATAAAATCAAATGGATTAGTTGAATTGTATA 49925 Query 47944 tttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCA 48003 ||||| | | || | ||| | | | | ||| ||||| || || || || || Sbjct 49926 ATTTTTCACAACCAAGTTCAGTTAATAAACGATCGGCAACAAACTCAATGTACTGCGACA 49985 Query 48004 TCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTT 48063 | | | |||||||| || || | |||| || ||||| || || | ||| || |||| Sbjct 49986 TTAAATTGCAATTCATCCCGATTAAACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTT 50045 Query 48064 CGATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATAC--AA 48121 | || || ||||| || || |||| ||||| ||| || | || Sbjct 50046 CAATTTCAACCGCATCGCGAATAATACTCGTTATACGTTCCT---TTGACGGCTTTTGAA 50102 Query 48122 CAA-ATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTA 48180 || || | |||||| |||||| ||||| || |||| | ||||||||| | ||||| Sbjct 50103 TAAGATATGTAAACAATAAACAAGCAAATTCGTAATGTAAACCTTCATCGCGCGAAATTA 50162 Query 48181 ATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCG 48240 |||| |||||||| || | ||||||||||| || || ||||| | |||||| || || | Sbjct 50163 ATTCATTAGAAAACGTTAAACCGGGCATTAAACCCCGCTTTTTCAACCAAAAAATAGCTG 50222 Query 48241 CGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGT 48300 | ||| ||| |||||||| || || || ||||||||||| || | | || || Sbjct 50223 CAAAACTTCCCGAAAAGAAAATACCCTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAA 50282 Query 48301 AACTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAG 48357 || | || | || ||||| | ||||||||||| ||||| || ||||||| Sbjct 50283 AAGTCGCGTTTTTACTACTAATCCAATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAG 50342 Query 48358 GCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTAT 48417 | | ||||| || || ||||| | ||| | ||||| || ||| || ||||| | Sbjct 50343 GAAGCGTTTCGATGGCGTTAAATAAAAATTCTTTTTGTTTTGGATCAGAAATATAAGTTT 50402 Query 48418 CTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAA 48477 | ||||| | || |||||||| ||||||||||||||||| || || ||||| ||||||| Sbjct 50403 CAATTAACATGCTGTACATTTCAGAGTGAATATTTTCAATAGCAATTTGAAAACCGTAAA 50462 Query 48478 AACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTA 48537 |||| | ||||| || | ||| || || || ||| |||||| | ||||| || |||| Sbjct 50463 AACAACGTGCTTCCGTTACCTGAACTTCTTGACTAAAACGTTCAACTAAATTTTCGTTTA 50522 Query 48538 CTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGG 48597 | ||||||||| |||||||||||| ||||| ||||| ||||||| |||||| Sbjct 50523 CAATTCCATCAGAAGCAGCAAAAAAGGCTAAAACATGGGAGATAAAATGACGTTCGTTAT 50582 Query 48598 AAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAA 48657 || | | | | ||| | ||||| |||||| || | |||||||||||||| ||||||| Sbjct 50583 CGGTTAATGTTTGCCAATGATTGAGATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAA 50642 Query 48658 ATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAA 48717 |||| || || || | ||| || | ||| |||||| || | || || |||| | Sbjct 50643 ATGAAGCTTCCGCCTGTTTGTATTTCGCCCAAATATCAGGATACTCAATGGGAAAAACGA 50702 Query 48718 CAAATCTATTTGGATTTTTTGCAAGGATAGGTTCCAT 48754 | || | ||||||| | ||| | |||||| || Sbjct 50703 CGAAACGTCTTGGATTATCACGAAGTAAAGGTTCAAT 50739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694607347861280