Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq241 127 5e-24
>seq241
Length=949647
Score = 127 bits (140), Expect = 5e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| || || || |||||||||||||||||||| | | ||| | |||||||| ||
Sbjct 167393 ATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTG 167334
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| ||||||||||| | | || || || | | |||||||||||| ||||| |||||
Sbjct 167333 TTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTT 167274
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
||| ||| |||| | | | || || ||| ||||| | ||||||||||| || ||
Sbjct 167273 AGCTTTAACATTCTCAATGGTATCAGATGGCTCAACTTCCAATGTAATAGTTTTTCCAGT 167214
Query 152081 GAGAGTCTTCACGAAGACCTGCATT 152105
| ||| || || |||| |||||||
Sbjct 167213 CAAAGTTTTGACAAAGATCTGCATT 167189
Score = 120 bits (132), Expect = 7e-22
Identities = 153/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||||||||| || || |||||||| |||||||| | | ||| | |||||||| |
Sbjct 166025 ATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAAAGAGTACGTCCATCTTCCAATTG 165966
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| || || ||||| | | || || || | | |||||||||||| |||||||| ||
Sbjct 165965 TTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCTTGAATCTT 165906
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
||| ||| | |||| | |||| || ||| ||||| | |||||||| || || ||
Sbjct 165905 AGCTTTAACATTTTCTATGGTGTCGGATGGCTCAACTTCCAATGTAATAGTCTTTCCAGT 165846
Query 152081 GAGAGTCTTCACGAAGACCTGCATTTTACCC 152111
| ||| || ||||||| ||||||| ||||
Sbjct 165845 CAAAGTTTTGACGAAGATCTGCATTCCACCC 165815
Score = 116 bits (128), Expect = 9e-21
Identities = 152/209 (73%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || |||||||| || |||||||| |||||||| | | ||| | ||||||||| |
Sbjct 167168 CAAG-TGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAAAGAGTGCGCCCATCTTCAA 167110
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||| ||||||||||| | | || || || | | ||||||||||| || || |
Sbjct 167109 GTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCCTTATCCTGGA 167050
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| ||| ||| | || | | | || || ||| ||||| | |||||||||||| |
Sbjct 167049 TTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCTAAAGTAATAGTTTTTC 166990
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105
| || | ||| || || || | |||||||
Sbjct 166989 CAGTCAAAGTTTTGACAAAAATCTGCATT 166961
Score = 109 bits (120), Expect = 1e-18
Identities = 154/215 (72%), Gaps = 1/215 (0%)
Strand=Plus/Minus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| || || || |||||||| ||||||||||| | | ||| | ||||||||||
Sbjct 167621 ATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTG 167562
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| ||||||||||| | | || || || | | |||||||||||| ||||| |||||
Sbjct 167561 TTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTT 167502
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
||| ||| | || | | | || ||| || ||||| || || || ||||| || ||
Sbjct 167501 AGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTTCTAGGGTGATGGTTTTTCCAGT 167442
Query 152081 GAGAGTCTTCACGAAGACCTGCATTTTACC-CTTA 152114
| || || ||||||| |||||| ||| ||||
Sbjct 167441 TAATGTTTTTACGAAGATTTGCATTCCACCTCTTA 167407
Score = 95.1 bits (104), Expect = 3e-14
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| || || || |||||||||||||||||||| | | ||| | || |||||||
Sbjct 166253 ATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCTTCTAATTG 166194
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| || || ||||| | | || || || | | |||||||| || || || |||||
Sbjct 166193 TTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGAATTCCTTCTTTATCCTGGATTTT 166134
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
||| ||| | || | | | || || ||| ||||| | |||||||||||| || ||
Sbjct 166133 AGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCCAAAGTAATAGTTTTTCCAGT 166074
Query 152081 GAGAGTCTTCACGAAGACCTGCATT 152105
| || || || |||| |||||||
Sbjct 166073 CAATGTTTTGACAAAGATCTGCATT 166049
Score = 95.1 bits (104), Expect = 3e-14
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
|||||| || || ||||| |||||||||||||| | | ||| | |||||||||||
Sbjct 166481 ATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGCCCATCTTCTAATTG 166422
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| || || ||||| | | || || || | | |||||||||||| ||||| || ||
Sbjct 166421 TTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGGGATTCCTTCCTTATCTTGGATCTT 166362
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
||| ||| | || | | |||| || || ||||| | || || ||||| || ||
Sbjct 166361 AGCTTTAACATTTTCAATGGTGTCGGATGGTTCGACTTCCAATGTGATGGTTTTACCAGT 166302
Query 152081 GAGAGTCTTCACGAAGACCTGCATT 152105
| ||||| || || | ||||||
Sbjct 166301 TAAGGTCTTAACAAAAATTTGCATT 166277
Score = 87.8 bits (96), Expect = 4e-12
Identities = 154/223 (69%), Gaps = 1/223 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | ||| ||||| || || |||||||| |||||||| | | || | ||||||
Sbjct 167857 AGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAAAGGGTACGTCCATCT 167798
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| | ||| || ||||| || | | ||| || || | | |||||||||||| |||
Sbjct 167797 TCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCCTTCCTTGTCT 167738
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| ||||| ||| ||| | || | | || ||| || ||||| | || || |||
Sbjct 167737 TGGATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAAGGTGATGGTT 167678
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTA 152114
|| || || | || || ||||||| |||||| ||| ||||
Sbjct 167677 TTTCCAGTTAATGTTTTTACGAAGATTTGCATTCCACCTCTTA 167635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153716178380667
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |