Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq241 127 5e-24 >seq241 Length=949647 Score = 127 bits (140), Expect = 5e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| || || || |||||||||||||||||||| | | ||| | |||||||| || Sbjct 167393 ATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCAAGTTG 167334 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| ||||||||||| | | || || || | | |||||||||||| ||||| ||||| Sbjct 167333 TTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTT 167274 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| ||| |||| | | | || || ||| ||||| | ||||||||||| || || Sbjct 167273 AGCTTTAACATTCTCAATGGTATCAGATGGCTCAACTTCCAATGTAATAGTTTTTCCAGT 167214 Query 152081 GAGAGTCTTCACGAAGACCTGCATT 152105 | ||| || || |||| ||||||| Sbjct 167213 CAAAGTTTTGACAAAGATCTGCATT 167189 Score = 120 bits (132), Expect = 7e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||||||||| || || |||||||| |||||||| | | ||| | |||||||| | Sbjct 166025 ATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAAAGAGTACGTCCATCTTCCAATTG 165966 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || ||||| | | || || || | | |||||||||||| |||||||| || Sbjct 165965 TTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCTTGAATCTT 165906 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| ||| | |||| | |||| || ||| ||||| | |||||||| || || || Sbjct 165905 AGCTTTAACATTTTCTATGGTGTCGGATGGCTCAACTTCCAATGTAATAGTCTTTCCAGT 165846 Query 152081 GAGAGTCTTCACGAAGACCTGCATTTTACCC 152111 | ||| || ||||||| ||||||| |||| Sbjct 165845 CAAAGTTTTGACGAAGATCTGCATTCCACCC 165815 Score = 116 bits (128), Expect = 9e-21 Identities = 152/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||| || |||||||| |||||||| | | ||| | ||||||||| | Sbjct 167168 CAAG-TGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAAAGAGTGCGCCCATCTTCAA 167110 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| ||||||||||| | | || || || | | ||||||||||| || || | Sbjct 167109 GTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCCTTATCCTGGA 167050 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| ||| | || | | | || || ||| ||||| | |||||||||||| | Sbjct 167049 TTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCTAAAGTAATAGTTTTTC 166990 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || | ||| || || || | ||||||| Sbjct 166989 CAGTCAAAGTTTTGACAAAAATCTGCATT 166961 Score = 109 bits (120), Expect = 1e-18 Identities = 154/215 (72%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| || || || |||||||| ||||||||||| | | ||| | |||||||||| Sbjct 167621 ATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTG 167562 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| ||||||||||| | | || || || | | |||||||||||| ||||| ||||| Sbjct 167561 TTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTTT 167502 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| ||| | || | | | || ||| || ||||| || || || ||||| || || Sbjct 167501 AGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTTCTAGGGTGATGGTTTTTCCAGT 167442 Query 152081 GAGAGTCTTCACGAAGACCTGCATTTTACC-CTTA 152114 | || || ||||||| |||||| ||| |||| Sbjct 167441 TAATGTTTTTACGAAGATTTGCATTCCACCTCTTA 167407 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| || || || |||||||||||||||||||| | | ||| | || ||||||| Sbjct 166253 ATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCTTCTAATTG 166194 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || ||||| | | || || || | | |||||||| || || || ||||| Sbjct 166193 TTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGAATTCCTTCTTTATCCTGGATTTT 166134 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| ||| | || | | | || || ||| ||||| | |||||||||||| || || Sbjct 166133 AGCTTTAACATTTTCAATGGTATCAGATGGCTCAACTTCCAAAGTAATAGTTTTTCCAGT 166074 Query 152081 GAGAGTCTTCACGAAGACCTGCATT 152105 | || || || |||| ||||||| Sbjct 166073 CAATGTTTTGACAAAGATCTGCATT 166049 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 |||||| || || ||||| |||||||||||||| | | ||| | ||||||||||| Sbjct 166481 ATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGCCCATCTTCTAATTG 166422 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || ||||| | | || || || | | |||||||||||| ||||| || || Sbjct 166421 TTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGGGATTCCTTCCTTATCTTGGATCTT 166362 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| ||| | || | | |||| || || ||||| | || || ||||| || || Sbjct 166361 AGCTTTAACATTTTCAATGGTGTCGGATGGTTCGACTTCCAATGTGATGGTTTTACCAGT 166302 Query 152081 GAGAGTCTTCACGAAGACCTGCATT 152105 | ||||| || || | |||||| Sbjct 166301 TAAGGTCTTAACAAAAATTTGCATT 166277 Score = 87.8 bits (96), Expect = 4e-12 Identities = 154/223 (69%), Gaps = 1/223 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| ||||| || || |||||||| |||||||| | | || | |||||| Sbjct 167857 AGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAAAGGGTACGTCCATCT 167798 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| || ||||| || | | ||| || || | | |||||||||||| ||| Sbjct 167797 TCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCCTTCCTTGTCT 167738 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||| ||| | || | | || ||| || ||||| | || || ||| Sbjct 167737 TGGATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAAGGTGATGGTT 167678 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTA 152114 || || || | || || ||||||| |||||| ||| |||| Sbjct 167677 TTTCCAGTTAATGTTTTTACGAAGATTTGCATTCCACCTCTTA 167635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153716178380667