Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq241 104 2e-17 seq569 95.1 1e-14 seq62 82.4 6e-11 >seq241 Length=949647 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||||||||| || || || || || |||||||| || ||||| ||||| Sbjct 166505 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCTTC 166564 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GATC 111217 ||| || ||| | || ||| ||||| || |||||||| | |||| | || | Sbjct 166565 TGATACTATTGAAAACGTTAAAGCTAAAATCCAGGATAAAGAAGG-GATCCCACCAGACC 166623 Query 111218 AACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 111277 ||||| | | || | || || |||||| | |||||| ||| | | ||||||| Sbjct 166624 AACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGACGTACTCTTTCGGATTATA 166683 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 | || ||||||||||| || || |||||||||||| | |||| ||||| Sbjct 166684 ACATCCAAAAAGAATCCACCCTCCATTTAGTGTTGAGATTGCGAGGTGG 166732 Score = 100 bits (110), Expect = 2e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||| || || ||||| || || || |||||||| ||| | ||| |||||| Sbjct 167645 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTC 167704 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| || ||| | || ||| ||||| ||||| ||||| | || ||||| Sbjct 167705 TGATACTATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167764 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| | | |||| || || ||||||||||||||| || | | ||||| || Sbjct 167765 ACAGCGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTACAA 167824 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAATAAA 111333 ||| ||||| ||||| || || |||||||| | || || || ||||| ||| || Sbjct 167825 TATCCAAAAGGAATCCACTCTGCATTTAGTTCTTCGCCTACGTGGTGGAAATTAA 167879 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| || || || ||||| |||||||| ||| ||||| ||||| Sbjct 166734 ATGCAAATTTTTGTTAAGACCTTAACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCT 166793 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || ||| || || || |||||||| |||| |||||| Sbjct 166794 GATACAATTGAAAATGTTAAAGCTAAGATCCAGGATAAAGAAGGAATTCCTCCAGATCAA 166853 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | | || | ||| || |||||| | |||||| ||| | | || || || Sbjct 166854 CAACGTTTAATCTTTGCTGGTAAACAACTTGAAGATGGGCGTACTCTTTCTGACTACAAC 166913 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||||||||| || || |||||||| ||| | || | ||||| Sbjct 166914 ATCCAAAAAGAATCAACTCTCCATTTAGTATTGAGATTGAGAGGTGG 166960 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||||||||| ||||| || ||||| ||||| ||||| || || Sbjct 166049 AATGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATC 166108 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || ||| ||||| || |||||||| |||| ||||| Sbjct 166109 TGATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGATCA 166168 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||| | | || | ||| || |||||||| ||||| ||| | | ||||| || Sbjct 166169 ACAACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAA 166228 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 || ||||||||||| || || ||||| |||||| Sbjct 166229 CATCCAAAAAGAATCAACCCTCCATTTGGTGTTG 166262 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||| || || ||||| || || || |||||||| ||| | ||| |||||| Sbjct 167417 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTC 167476 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || ||| ||||| ||||| ||||| | || ||||| Sbjct 167477 TGATACCATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167536 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||| | | || | || || |||||||| |||||| | ||| | | ||||| || Sbjct 167537 ACAACGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAA 167596 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 || ||||||||||| || || |||||||| ||| Sbjct 167597 CATTCAAAAAGAATCAACCCTCCATTTAGTATTG 167630 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||||||||| ||||| || ||||| ||||| ||||| || || Sbjct 167189 AATGCAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATC 167248 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || ||| ||||| ||||| ||||| | || ||||| Sbjct 167249 TGATACCATTGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167308 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||| | | || | || || |||||| | |||||| | ||| | | ||||| || Sbjct 167309 ACAACGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAA 167368 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 || ||||||||||| || || |||||||| ||| Sbjct 167369 CATCCAAAAAGAATCAACCCTCCATTTAGTATTG 167402 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| |||||||||||||| ||||| || ||||| ||||| | ||| || || Sbjct 166961 AATGCAGATTTTTGTCAAAACTTTGACTGGAAAAACTATTACTTTAGAAGTTGAGCCATC 167020 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || ||| ||||| || || ||||| |||| ||||| Sbjct 167021 TGATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCA 167080 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||| | | || | || || |||||| | |||||| ||| | | ||||| || Sbjct 167081 ACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGGCGCACTCTTTCTGATTACAA 167140 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||| ||||| |||||||| || || || || ||| | || | ||||| Sbjct 167141 TATCCAAAAGGAATCTACTCTCCACTTGGTATTGAGATTGAGAGGTGG 167188 >seq569 Length=200630 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||||||||| || ||||| | ||||| |||||||| ||| | || |||||| Sbjct 134392 AATGCAAATTTTCGTGAAAACCCTAACCGGTAAAACCATCACCCTCGAGGTTGAACCCTC 134451 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 |||| | | | | || || |||||| ||||| || || | || ||||| Sbjct 134452 CGATACCATCGAAAATGTCAAGGCAAAAATCCAAGACAAGGAGGGTATCCCACCAGATCA 134511 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||| | | || | || || |||||| |||||||| ||| | |||| || || Sbjct 134512 ACAACGTTTAATCTTCGCTGGTAAACAACTGGAAGATGGACGCACTCTTTCCGACTACAA 134571 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 || ||||| ||||| || || || || ||||||||||| || ||||||| Sbjct 134572 CATTCAAAAGGAATCGACGCTTCACTTGGTGTTGCGTCTTCGTGGTGGCA 134621 >seq62 Length=648032 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 111095 TAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAAC 111154 ||| ||||||||| || || |||| || || || |||||||| ||| ||||| ||||| Sbjct 445524 TAAGAATGCAAATCTTCGTAAAAAGTTTAACTGGAAAAACCATCACCTTGGAAGTGGAAC 445583 Query 111155 CCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCG 111214 | | ||| || |||| | |||||| || ||| ||||| ||| | |||| | Sbjct 445584 CTACTGATACTATTGGAAATGTAAAAGTTAAGATTCAAGACAAGGAAAGGATTCCACCGG 445643 Query 111215 ATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATT 111274 ||||||| | | |||| | ||| ||||||||||| || | | |||| Sbjct 445644 ATCAACAGCGTTTAATTTTCCATCGTAAAGAATTGGAAGATGGACGTACCCTTTCAGATT 445703 Query 111275 ATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA 111329 | ||||| | || ||||||| || ||||||| | || || || ||||| || Sbjct 445704 ACAATATCTATAAGAAATCTACTCTGTATTTAGTTATTCGCCTACGTGGTGGAAA 445758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421774818388552