Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1159 376 3e-99 >seq1159 Length=103958 Score = 376 bits (416), Expect = 3e-99 Identities = 580/825 (70%), Gaps = 6/825 (1%) Strand=Plus/Plus Query 23208 AACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAA 23267 |||||| |||||| || |||||||| | | || || ||||| || || || Sbjct 49822 AACACCAGCTTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATC 49881 Query 23268 TGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAA 23327 |||||| | |||||||||||||||||||| | ||| |||| || ||| | Sbjct 49882 AGATATAAGATTCATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACAACCAAG 49941 Query 23328 TTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTAT 23387 ||| |||| | | ||| || ||||| ||||| || || |||| |||| | || || Sbjct 49942 TTCAGTTAATAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCAT 50001 Query 23388 ACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATC 23447 || |||| | || |||| |||||| ||| ||| | |||||| ||| ||||| Sbjct 50002 CCCGATTAAACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCATC 50061 Query 23448 TTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTT--TAA-ATACTTAAACAA 23504 ||| || ||| ||| | | | || | || ||| ||| ||||||| Sbjct 50062 GCGAATAATACTCGTTATACGTTCCT---TTGACGGCTTTTGAATAAGATATGTAAACAA 50118 Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564 |||||| ||||| || |||||| |||||||| | ||| |||||||||||||| || Sbjct 50119 TAAACAAGCAAATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGT 50178 Query 23565 TAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAA 23624 ||| || |||||||| || || ||||| | |||||| || || ||||| ||| ||||| Sbjct 50179 TAAACCGGGCATTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAA 50238 Query 23625 GAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATC 23684 ||||||||||||||| |||||||| || || | |||| ||||| || || || | | Sbjct 50239 GAAAATACCCTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACT 50298 Query 23685 AGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGC 23744 | |||||| ||| | ||||| ||| ||| ||| ||||| || ||||| || || Sbjct 50299 ACTAATCCAATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGC 50358 Query 23745 TTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATA 23804 || || | ||| ||||| || ||| | ||||| || ||||||| | || || Sbjct 50359 GTTAAATAAAAATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTA 50418 Query 23805 CATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGA 23864 ||||||||| |||||||||||||||||||| ||||| || |||||||| | ||||| | Sbjct 50419 CATTTCAGAGTGAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGT 50478 Query 23865 CAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGC 23924 | ||||| || | | ||| | || | ||||||||||||| ||||| |||||| ||| Sbjct 50479 TACCTGAACTTCTTGACTAAAACGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGC 50538 Query 23925 AGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCA 23984 |||||| || || | ||||| |||||||| | ||| | | | |||| ||| ||| Sbjct 50539 AGCAAAAAAGGCTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTTTGCCA 50598 Query 23985 ATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 || ||| | |||||| || | ||| ||||| ||| |||||||| Sbjct 50599 ATGATTGAGATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAA 50643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521441867867800