Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1159 376 3e-99
>seq1159
Length=103958
Score = 376 bits (416), Expect = 3e-99
Identities = 580/825 (70%), Gaps = 6/825 (1%)
Strand=Plus/Plus
Query 23208 AACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAA 23267
|||||| |||||| || |||||||| | | || || ||||| || || ||
Sbjct 49822 AACACCAGCTTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATC 49881
Query 23268 TGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAA 23327
|||||| | |||||||||||||||||||| | ||| |||| || ||| |
Sbjct 49882 AGATATAAGATTCATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACAACCAAG 49941
Query 23328 TTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTAT 23387
||| |||| | | ||| || ||||| ||||| || || |||| |||| | || ||
Sbjct 49942 TTCAGTTAATAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCAT 50001
Query 23388 ACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATC 23447
|| |||| | || |||| |||||| ||| ||| | |||||| ||| |||||
Sbjct 50002 CCCGATTAAACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCATC 50061
Query 23448 TTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTT--TAA-ATACTTAAACAA 23504
||| || ||| ||| | | | || | || ||| ||| |||||||
Sbjct 50062 GCGAATAATACTCGTTATACGTTCCT---TTGACGGCTTTTGAATAAGATATGTAAACAA 50118
Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564
|||||| ||||| || |||||| |||||||| | ||| |||||||||||||| ||
Sbjct 50119 TAAACAAGCAAATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGT 50178
Query 23565 TAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAA 23624
||| || |||||||| || || ||||| | |||||| || || ||||| ||| |||||
Sbjct 50179 TAAACCGGGCATTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAA 50238
Query 23625 GAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATC 23684
||||||||||||||| |||||||| || || | |||| ||||| || || || | |
Sbjct 50239 GAAAATACCCTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACT 50298
Query 23685 AGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGC 23744
| |||||| ||| | ||||| ||| ||| ||| ||||| || ||||| || ||
Sbjct 50299 ACTAATCCAATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGC 50358
Query 23745 TTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATA 23804
|| || | ||| ||||| || ||| | ||||| || ||||||| | || ||
Sbjct 50359 GTTAAATAAAAATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTA 50418
Query 23805 CATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGA 23864
||||||||| |||||||||||||||||||| ||||| || |||||||| | ||||| |
Sbjct 50419 CATTTCAGAGTGAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGT 50478
Query 23865 CAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGC 23924
| ||||| || | | ||| | || | ||||||||||||| ||||| |||||| |||
Sbjct 50479 TACCTGAACTTCTTGACTAAAACGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGC 50538
Query 23925 AGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCA 23984
|||||| || || | ||||| |||||||| | ||| | | | |||| ||| |||
Sbjct 50539 AGCAAAAAAGGCTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTTTGCCA 50598
Query 23985 ATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029
|| ||| | |||||| || | ||| ||||| ||| ||||||||
Sbjct 50599 ATGATTGAGATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAA 50643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521441867867800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |