Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq241 132 3e-26
>seq241
Length=949647
Score = 132 bits (146), Expect = 3e-26
Identities = 170/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| ||||||| |||||| |||| ||||| || ||||||||||| ||||||||
Sbjct 166052 CATTCCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATC 165993
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || || | || |||| || || || |||||||||||||| || |||||||
Sbjct 165992 AGAAAGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGG 165933
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| || ||||| |||| || || |||||||||||| | |
Sbjct 165932 TGGGATTCCTTCCTTATCTTGAATCTTA-GCTTTAACATTTTCTATGGTGTCGGATGGCT 165874
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || |||| ||||| |||||||| || | || || |||||||| |||||
Sbjct 165873 CAACTTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 165822
Score = 114 bits (126), Expect = 9e-21
Identities = 168/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| ||||||| |||||| || | ||||| ||| || || |||||||||||
Sbjct 166511 TTGCATTCCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTA 166452
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | || |||| | || || | || || || |||||||| || || || |||||
Sbjct 166451 ATCAGAAAGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATC 166392
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGG 44282
|| || | |||||||| || ||||| |||| || || | |||||||||| |
Sbjct 166391 TGGTGGGATTCCTTCCTTATCTTGGATCTT-AGCTTTAACATTTTCAATGGTGTCGGATG 166333
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || |||| || || || || || || | |||||| || || ||||||||
Sbjct 166332 GTTCGACTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166278
Score = 109 bits (120), Expect = 4e-19
Identities = 173/247 (70%), Gaps = 1/247 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || |||| |||||| |||| ||| || || ||||||||||| ||||||||
Sbjct 165824 CATTCCACCCCTCAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATC 165765
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || | || || | || || |||||||||||||| || || || ||||
Sbjct 165764 GGAAAGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGG 165705
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || || || ||| || ||| ||||| || | || ||||| | | ||
Sbjct 165704 TGGGATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTC 165645
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAAT 44346
||||| | ||| || || || || || | ||| |||||||| || ||||| ||| |||
Sbjct 165644 GACCTCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT-CTGTTAAT 165586
Query 44347 GAAAATA 44353
|||||
Sbjct 165585 CGAAATA 165579
Score = 109 bits (120), Expect = 4e-19
Identities = 165/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| ||||||| |||||| |||| ||| || || ||||||||||| ||||||||
Sbjct 167192 CATTCCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATC 167133
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || || || || || ||||| ||||| ||||| || |||||||
Sbjct 167132 AGAAAGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGG 167073
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGGATT 44285
||| | |||||||| ||| || || |||| || || | ||||| || | | |
Sbjct 167072 AGGAATTCCTTCCTTATCCTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGATGGCT 167014
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || | ||||| || ||||| || | || || || || || |||||
Sbjct 167013 CAACTTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962
Score = 105 bits (116), Expect = 5e-18
Identities = 166/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| ||||||| ||||||||||| || || || || ||||||||||||||
Sbjct 166283 TTGCATTCCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTA 166224
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | || ||| |||| || | || || || |||||||| || || || |||||
Sbjct 166223 ATCAGAAAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATC 166164
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGG 44282
|| ||| | ||||| || ||| || || |||| || || | ||||| || | |
Sbjct 166163 TGGAGGAATTCCTTCTTTATCCTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGATG 166105
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||| ||||| || ||||| || | || || || ||||| |||||
Sbjct 166104 GCTCAACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| ||||||| |||||| || | || || || || |||||||||||||| ||
Sbjct 166964 CATTCCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTC 166905
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| | || || || || || || |||||||| ||||| || |||||||
Sbjct 166904 AGAAAGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGG 166845
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGGATT 44285
||| | ||||| || ||| ||||| |||| || || | || || || | | ||
Sbjct 166844 AGGAATTCCTTCTTTATCCTGGATCTT-AGCTTTAACATTTTCAATTGTATCAGAAGGTT 166786
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || |||| || || || || || || | |||||| || || ||||||||
Sbjct 166785 CAACTTCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734
Score = 93.3 bits (102), Expect = 3e-14
Identities = 163/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| ||||| | ||||| || | || || || || ||||||||||||||
Sbjct 167423 TTGCATTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTA 167364
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | || || | || || || || || ||||| ||||||||||| || |||||
Sbjct 167363 ATCAGAAAGAGTACGACCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATC 167304
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282
|| || | |||||||| || || || |||| || ||| | ||||| || | |
Sbjct 167303 TGGTGGGATTCCTTCCTTGTCTTGGAT-TTTAGCTTTAACATTCTCAATGGTATCAGATG 167245
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||| ||||| || ||||| || | || || || ||||| |||||
Sbjct 167244 GCTCAACTTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190
Score = 87.8 bits (96), Expect = 1e-12
Identities = 162/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||| || ||||||||| | || || ||| || ||||||||||| ||
Sbjct 166739 TTGCATACCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATA 166680
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | || || | || || || || || ||||| ||||| ||||| || || ||
Sbjct 166679 ATCCGAAAGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTC 166620
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCGG 44282
|| || | ||||| || ||| || || |||| || | || | || || || | |
Sbjct 166619 TGGTGGGATCCCTTCTTTATCCTGGAT-TTTAGCTTTAACGTTTTCAATAGTATCAGAAG 166561
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || |||| || || || || || || | |||||| || || ||||||||
Sbjct 166560 GTTCGACTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166506
Score = 84.2 bits (92), Expect = 2e-11
Identities = 161/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| ||||| | ||||| || | || || || || ||||| ||||||||
Sbjct 167651 TTGCATTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTA 167592
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | || || | || || | || || ||||| ||||| ||||| || |||||
Sbjct 167591 ATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATC 167532
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGG 44282
|| || | |||||||| || || || |||| || || | ||||| || | |
Sbjct 167531 TGGTGGGATTCCTTCCTTGTCTTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGAAG 167473
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| || | || || || ||||| || | || || ||||||||||||||
Sbjct 167472 GTTCCACTTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359959350490509
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |