Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq241 132 3e-26 >seq241 Length=949647 Score = 132 bits (146), Expect = 3e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| ||||||| |||||| |||| ||||| || ||||||||||| |||||||| Sbjct 166052 CATTCCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATC 165993 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || | || |||| || || || |||||||||||||| || ||||||| Sbjct 165992 AGAAAGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGG 165933 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| || ||||| |||| || || |||||||||||| | | Sbjct 165932 TGGGATTCCTTCCTTATCTTGAATCTTA-GCTTTAACATTTTCTATGGTGTCGGATGGCT 165874 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || |||| ||||| |||||||| || | || || |||||||| ||||| Sbjct 165873 CAACTTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 165822 Score = 114 bits (126), Expect = 9e-21 Identities = 168/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||||| |||||| || | ||||| ||| || || ||||||||||| Sbjct 166511 TTGCATTCCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTA 166452 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || |||| | || || | || || || |||||||| || || || ||||| Sbjct 166451 ATCAGAAAGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATC 166392 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGG 44282 || || | |||||||| || ||||| |||| || || | |||||||||| | Sbjct 166391 TGGTGGGATTCCTTCCTTATCTTGGATCTT-AGCTTTAACATTTTCAATGGTGTCGGATG 166333 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || |||| || || || || || || | |||||| || || |||||||| Sbjct 166332 GTTCGACTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166278 Score = 109 bits (120), Expect = 4e-19 Identities = 173/247 (70%), Gaps = 1/247 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || |||| |||||| |||| ||| || || ||||||||||| |||||||| Sbjct 165824 CATTCCACCCCTCAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATC 165765 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || || | || || | || || |||||||||||||| || || || |||| Sbjct 165764 GGAAAGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGG 165705 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || || || ||| || ||| ||||| || | || ||||| | | || Sbjct 165704 TGGGATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTC 165645 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAAT 44346 ||||| | ||| || || || || || | ||| |||||||| || ||||| ||| ||| Sbjct 165644 GACCTCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT-CTGTTAAT 165586 Query 44347 GAAAATA 44353 ||||| Sbjct 165585 CGAAATA 165579 Score = 109 bits (120), Expect = 4e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| ||||||| |||||| |||| ||| || || ||||||||||| |||||||| Sbjct 167192 CATTCCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATC 167133 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || |||| | || || || || || ||||| ||||| ||||| || ||||||| Sbjct 167132 AGAAAGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGG 167073 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGGATT 44285 ||| | |||||||| ||| || || |||| || || | ||||| || | | | Sbjct 167072 AGGAATTCCTTCCTTATCCTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGATGGCT 167014 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || | ||||| || ||||| || | || || || || || ||||| Sbjct 167013 CAACTTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962 Score = 105 bits (116), Expect = 5e-18 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||||| ||||||||||| || || || || |||||||||||||| Sbjct 166283 TTGCATTCCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTA 166224 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || ||| |||| || | || || || |||||||| || || || ||||| Sbjct 166223 ATCAGAAAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATC 166164 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGG 44282 || ||| | ||||| || ||| || || |||| || || | ||||| || | | Sbjct 166163 TGGAGGAATTCCTTCTTTATCCTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGATG 166105 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| ||||| || ||||| || | || || || ||||| ||||| Sbjct 166104 GCTCAACTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| ||||||| |||||| || | || || || || |||||||||||||| || Sbjct 166964 CATTCCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTC 166905 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || || || || || |||||||| ||||| || ||||||| Sbjct 166904 AGAAAGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGG 166845 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGGATT 44285 ||| | ||||| || ||| ||||| |||| || || | || || || | | || Sbjct 166844 AGGAATTCCTTCTTTATCCTGGATCTT-AGCTTTAACATTTTCAATTGTATCAGAAGGTT 166786 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || |||| || || || || || || | |||||| || || |||||||| Sbjct 166785 CAACTTCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734 Score = 93.3 bits (102), Expect = 3e-14 Identities = 163/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||| | ||||| || | || || || || |||||||||||||| Sbjct 167423 TTGCATTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTA 167364 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || || | || || || || || ||||| ||||||||||| || ||||| Sbjct 167363 ATCAGAAAGAGTACGACCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATC 167304 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | |||||||| || || || |||| || ||| | ||||| || | | Sbjct 167303 TGGTGGGATTCCTTCCTTGTCTTGGAT-TTTAGCTTTAACATTCTCAATGGTATCAGATG 167245 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| ||||| || ||||| || | || || || ||||| ||||| Sbjct 167244 GCTCAACTTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||| || ||||||||| | || || ||| || ||||||||||| || Sbjct 166739 TTGCATACCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATA 166680 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || || | || || || || || ||||| ||||| ||||| || || || Sbjct 166679 ATCCGAAAGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTC 166620 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCGG 44282 || || | ||||| || ||| || || |||| || | || | || || || | | Sbjct 166619 TGGTGGGATCCCTTCTTTATCCTGGAT-TTTAGCTTTAACGTTTTCAATAGTATCAGAAG 166561 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || |||| || || || || || || | |||||| || || |||||||| Sbjct 166560 GTTCGACTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166506 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||| | ||||| || | || || || || ||||| |||||||| Sbjct 167651 TTGCATTCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTA 167592 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || || | || || | || || ||||| ||||| ||||| || ||||| Sbjct 167591 ATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATC 167532 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGG 44282 || || | |||||||| || || || |||| || || | ||||| || | | Sbjct 167531 TGGTGGGATTCCTTCCTTGTCTTGGAT-TTTAGCTTTAACATTTTCAATGGTATCAGAAG 167473 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || | || || || ||||| || | || || |||||||||||||| Sbjct 167472 GTTCCACTTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359959350490509