Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq569 168 2e-36 seq241 161 2e-34 seq412 138 3e-27 seq62 118 3e-21 >seq569 Length=200630 Score = 168 bits (186), Expect = 2e-36 Identities = 161/205 (79%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||||||||| || || || ||||| |||||||||||||| ||| ||| || Sbjct 134396 CAAATTTTCGTGAAAACCCTAACCGGTAAAACCATCACCCTCGAGGTTGAACCCTCCGAT 134455 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||| || || ||||| || || ||||| || || || ||| Sbjct 134456 ACCATCGAAAATGTCAAGGCAAAAATCCAAGACAAGGAGGGTATCCCACCAGATCAACAA 134515 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || ||||| || ||||||||| | |||||| |||| || ||| | Sbjct 134516 CGTTTAATCTTCGCTGGTAAACAACTGGAAGATGGACGCACTCTTTCCGACTACAACATT 134575 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| ||||| || || || |||| Sbjct 134576 CAAAAGGAATCGACGCTTCA-CTTG 134599 >seq241 Length=949647 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| ||||| | || |||||||| |||||||| || |||||| || || Sbjct 167421 CAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTCTGAT 167480 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| || || || ||||| ||||||||||| || || || ||| Sbjct 167481 ACCATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAACAA 167540 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| ||||| | |||||||| | |||||| | ||||| ||| | Sbjct 167541 CGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAACATT 167600 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135 |||||||||||||| || ||| | || ||||| Sbjct 167601 CAAAAAGAATCAACCCTCCATTTAGTATTGAG 167632 Score = 159 bits (176), Expect = 8e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || || | || || ||||| ||||| | || || ||| || || Sbjct 166509 CAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCTTCTGAT 166568 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| || || ||||| |||||||| ||||| || ||||| ||| Sbjct 166569 ACTATTGAAAACGTTAAAGCTAAAATCCAGGATAAAGAAGGGATCCCACCAGACCAACAA 166628 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| ||||| || ||||||||| | |||||| | ||||||||| || Sbjct 166629 CGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGACGTACTCTTTCGGATTATAACATC 166688 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 ||||||||||| || || ||| | || |||||| Sbjct 166689 CAAAAAGAATCCACCCTCCATTTAGTGTTGAGA 166721 Score = 149 bits (164), Expect = 2e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || |||||| | || |||||||| || || | || || || || || Sbjct 167193 CAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATCTGAT 167252 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| || ||| || || || ||||| ||||||||||| || || || ||| Sbjct 167253 ACCATTGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAACAA 167312 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| ||||| || |||||||| | |||||| | ||||| ||| || Sbjct 167313 CGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAACATC 167372 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135 |||||||||||||| || ||| | || ||||| Sbjct 167373 CAAAAAGAATCAACCCTCCATTTAGTATTGAG 167404 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || || | || || ||||| |||||| | || || ||| || || Sbjct 166737 CAAATTTTTGTTAAGACCTTAACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCTGAT 166796 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||||| ||||| ||||||||||| ||||| || || ||| Sbjct 166797 ACAATTGAAAATGTTAAAGCTAAGATCCAGGATAAAGAAGGAATTCCTCCAGATCAACAA 166856 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || ||||| || |||||||| | |||||| | || || ||| || Sbjct 166857 CGTTTAATCTTTGCTGGTAAACAACTTGAAGATGGGCGTACTCTTTCTGACTACAACATC 166916 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||||||||||| || ||| | || |||||| | ||| Sbjct 166917 CAAAAAGAATCAACTCTCCATTTAGTATTGAGATTGAGA 166955 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| | || || ||||| ||||| | ||||| || || ||| Sbjct 165597 CAGATTTTCGTGAAAACCTTGACTGGTAAAACCATCACGTTAGAGGTCGAGCCATCTGAC 165656 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || || || ||||||||||| || ||||| || ||||| ||| Sbjct 165657 ACTATTGAAAATGTGAAGGCGAAAATCCAGGACAAAGAGGGGATCCCACCAGACCAACAA 165716 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| ||||||||||| | ||||||||| | || ||| ||||||| || || Sbjct 165717 CGGTTGATCTTTGCCGGAAAACAATTAGAAGATGGACGTACCCTTTCCGATTACAATATC 165776 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 ||||| |||||||| || || | || |||||| Sbjct 165777 CAAAAGGAATCAACTCTCCACTTGGTATTGAGA 165809 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| |||||| | || ||||| || || || | || || || || ||| Sbjct 165825 CAGATCTTCGTCAAAACTTTGACTGGAAAGACTATTACATTGGAAGTTGAGCCATCCGAC 165884 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| |||||||| || || ||||||||||| || || || ||| Sbjct 165885 ACCATAGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATCCCACCAGATCAACAA 165944 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || |||||||| | ||||||||| | |||||| | ||||| || || Sbjct 165945 CGTTTGATCTTTGCTGGAAAACAATTGGAAGATGGACGTACTCTTTCTGATTACAATATC 166004 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| |||||||| || ||| | || |||||| | ||| Sbjct 166005 CAAAAGGAATCAACTCTTCATTTGGTATTGAGATTGAGA 166043 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| | || |||||||| || || | || || || || || Sbjct 166053 CAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATCTGAT 166112 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| || || ||||| ||||||||||| ||||| || || ||| Sbjct 166113 ACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGATCAACAA 166172 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||| || || ||||| | ||||| ||| | |||||| | ||||| ||| || Sbjct 166173 CGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAACATC 166232 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||||||||||| || ||| | || |||||| | ||| Sbjct 166233 CAAAAAGAATCAACCCTCCATTTGGTGTTGAGATTGAGA 166271 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || || | || || ||||| ||||| | || || ||| || ||| Sbjct 166281 CAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCATCCGAC 166340 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| ||||| || || || ||||||||||| || || || ||| Sbjct 166341 ACCATTGAAAATGTTAAAGCTAAGATCCAAGATAAGGAAGGAATCCCACCAGATCAACAA 166400 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||| || || ||||| | |||||||| | |||||| | ||||| ||| || Sbjct 166401 CGATTAATCTTTGCTGGTAAACAATTAGAAGATGGGCGCACTCTTTCTGATTACAACATC 166460 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || |||||||| || || ||| | || |||||| | ||| Sbjct 166461 CAGAAAGAATCCACCCTTCATTTAGTATTGAGATTGAGA 166499 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || |||||| | || |||||||| || || | || || || || || Sbjct 166965 CAGATTTTTGTCAAAACTTTGACTGGAAAAACTATTACTTTAGAAGTTGAGCCATCTGAT 167024 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| || || ||||| || |||||||| ||||| || || ||| Sbjct 167025 ACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCAACAA 167084 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| ||||| || |||||||| | |||||| | ||||| || || Sbjct 167085 CGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGGCGCACTCTTTCTGATTACAATATC 167144 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| ||||| || || || | || |||||| | ||| Sbjct 167145 CAAAAGGAATCTACTCTCCACTTGGTATTGAGATTGAGA 167183 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| ||||| | || |||||||| |||||| | || |||||| || || Sbjct 167649 CAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTCTGAT 167708 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || || || ||||| ||||||||||| || || || || Sbjct 167709 ACTATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAACAG 167768 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||| || ||||| | ||||||||| | || ||| | ||||| || || Sbjct 167769 CGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTACAATATC 167828 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 ||||| ||||| || |||||| | ||| Sbjct 167829 CAAAAGGAATCCACTCTGCATTTAGTT 167855 >seq412 Length=275653 Score = 138 bits (152), Expect = 3e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || |||||| | || || || || || || || ||||| || || || Sbjct 82792 CAGATCTTTGTTAAAACTTTAACTGGCAAGACCATAACTCTTGAGGTCGAGCCTTCCGAT 82851 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| || |||||||| |||||||| ||||| || || Sbjct 82852 ACCATCGAAAATGTCAAGGCTAAGATCCAAGACAAAGAGGGAATCCCACCGGATCAACAG 82911 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||| |||||||| ||||||||||| | |||||| | |||||||| | Sbjct 82912 CGTTTAATTTTCGCGGGAAAACAACTCGAAGATGGGCGCACTCTTTCTGATTATAATATT 82971 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || ||||||||||| ||||| Sbjct 82972 CAGAAAGAATCAACGTTGCAT 82992 >seq62 Length=648032 Score = 118 bits (130), Expect = 3e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 177921 CTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA 177980 ||| | || ||||| |||||| | || ||| ||| |||||| | | |||||| || Sbjct 445313 CTCTACATCTTCGTAAAAACTTTAACTGGAGAAATCATCACCTTAGGAGTGGAACCTTCT 445372 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || ||||| || || || ||| || || || || | ||||||||||| || || | Sbjct 445373 GATACCATTGAAAATGTTAAAGCTAAAATCCAAGATACGGAAGGAATCCCACCAGATGAA 445432 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 ||||| | |||||| | || ||||| || |||||||| | |||||| | ||||| ||| Sbjct 445433 CAACGTTTAATCTTCTCTGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAAC 445492 Query 178101 GTCCAAAAAGAATCAACACTGCA 178123 | |||||||||||||| || || Sbjct 445493 ATTCAAAAAGAATCAACCCTCCA 445515 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/125 (78%), Gaps = 4/125 (3%) Strand=Plus/Plus Query 177999 AAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA-CGACTT--ATCTTC 178055 |||| ||| || || |||| ||||||||||| || || || ||| | | || |||||| Sbjct 445191 AAACTAAA-ATCCAATACAAGGAAGGAATCCCACCAGATCAACAAACAAGTTTAATCTTC 445249 Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115 || || ||||| || |||||||| | |||||| | ||||| ||| | |||||||||||| Sbjct 445250 GCTGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAACATTCAAAAAGAATCA 445309 Query 178116 ACACT 178120 || || Sbjct 445310 ACCCT 445314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203622052801938