Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq569 168 2e-36
seq241 161 2e-34
seq412 138 3e-27
seq62 118 3e-21
>seq569
Length=200630
Score = 168 bits (186), Expect = 2e-36
Identities = 161/205 (79%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||||||||| || || || ||||| |||||||||||||| ||| ||| ||
Sbjct 134396 CAAATTTTCGTGAAAACCCTAACCGGTAAAACCATCACCCTCGAGGTTGAACCCTCCGAT 134455
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||| || || ||||| || || ||||| || || || |||
Sbjct 134456 ACCATCGAAAATGTCAAGGCAAAAATCCAAGACAAGGAGGGTATCCCACCAGATCAACAA 134515
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || ||||| || ||||||||| | |||||| |||| || ||| |
Sbjct 134516 CGTTTAATCTTCGCTGGTAAACAACTGGAAGATGGACGCACTCTTTCCGACTACAACATT 134575
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| ||||| || || || ||||
Sbjct 134576 CAAAAGGAATCGACGCTTCA-CTTG 134599
>seq241
Length=949647
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| ||||| | || |||||||| |||||||| || |||||| || ||
Sbjct 167421 CAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTCTGAT 167480
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| || || || ||||| ||||||||||| || || || |||
Sbjct 167481 ACCATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAACAA 167540
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| ||||| | |||||||| | |||||| | ||||| ||| |
Sbjct 167541 CGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAACATT 167600
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135
|||||||||||||| || ||| | || |||||
Sbjct 167601 CAAAAAGAATCAACCCTCCATTTAGTATTGAG 167632
Score = 159 bits (176), Expect = 8e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || || || | || || ||||| ||||| | || || ||| || ||
Sbjct 166509 CAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCTTCTGAT 166568
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| ||| || || ||||| |||||||| ||||| || ||||| |||
Sbjct 166569 ACTATTGAAAACGTTAAAGCTAAAATCCAGGATAAAGAAGGGATCCCACCAGACCAACAA 166628
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| ||||| || ||||||||| | |||||| | ||||||||| ||
Sbjct 166629 CGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGACGTACTCTTTCGGATTATAACATC 166688
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
||||||||||| || || ||| | || ||||||
Sbjct 166689 CAAAAAGAATCCACCCTCCATTTAGTGTTGAGA 166721
Score = 149 bits (164), Expect = 2e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || |||||| | || |||||||| || || | || || || || ||
Sbjct 167193 CAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATCTGAT 167252
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||| || ||| || || || ||||| ||||||||||| || || || |||
Sbjct 167253 ACCATTGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAACAA 167312
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| ||||| || |||||||| | |||||| | ||||| ||| ||
Sbjct 167313 CGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAACATC 167372
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135
|||||||||||||| || ||| | || |||||
Sbjct 167373 CAAAAAGAATCAACCCTCCATTTAGTATTGAG 167404
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || || || | || || ||||| |||||| | || || ||| || ||
Sbjct 166737 CAAATTTTTGTTAAGACCTTAACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCTGAT 166796
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| ||||| ||||| ||||||||||| ||||| || || |||
Sbjct 166797 ACAATTGAAAATGTTAAAGCTAAGATCCAGGATAAAGAAGGAATTCCTCCAGATCAACAA 166856
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || ||||| || |||||||| | |||||| | || || ||| ||
Sbjct 166857 CGTTTAATCTTTGCTGGTAAACAACTTGAAGATGGGCGTACTCTTTCTGACTACAACATC 166916
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||||||||||| || ||| | || |||||| | |||
Sbjct 166917 CAAAAAGAATCAACTCTCCATTTAGTATTGAGATTGAGA 166955
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| | || || ||||| ||||| | ||||| || || |||
Sbjct 165597 CAGATTTTCGTGAAAACCTTGACTGGTAAAACCATCACGTTAGAGGTCGAGCCATCTGAC 165656
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || || || ||||||||||| || ||||| || ||||| |||
Sbjct 165657 ACTATTGAAAATGTGAAGGCGAAAATCCAGGACAAAGAGGGGATCCCACCAGACCAACAA 165716
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| ||||||||||| | ||||||||| | || ||| ||||||| || ||
Sbjct 165717 CGGTTGATCTTTGCCGGAAAACAATTAGAAGATGGACGTACCCTTTCCGATTACAATATC 165776
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
||||| |||||||| || || | || ||||||
Sbjct 165777 CAAAAGGAATCAACTCTCCACTTGGTATTGAGA 165809
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| |||||| | || ||||| || || || | || || || || |||
Sbjct 165825 CAGATCTTCGTCAAAACTTTGACTGGAAAGACTATTACATTGGAAGTTGAGCCATCCGAC 165884
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| |||||||| || || ||||||||||| || || || |||
Sbjct 165885 ACCATAGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATCCCACCAGATCAACAA 165944
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || |||||||| | ||||||||| | |||||| | ||||| || ||
Sbjct 165945 CGTTTGATCTTTGCTGGAAAACAATTGGAAGATGGACGTACTCTTTCTGATTACAATATC 166004
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| |||||||| || ||| | || |||||| | |||
Sbjct 166005 CAAAAGGAATCAACTCTTCATTTGGTATTGAGATTGAGA 166043
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || ||||| | || |||||||| || || | || || || || ||
Sbjct 166053 CAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATCTGAT 166112
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| || || ||||| ||||||||||| ||||| || || |||
Sbjct 166113 ACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGATCAACAA 166172
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | ||||| || || ||||| | ||||| ||| | |||||| | ||||| ||| ||
Sbjct 166173 CGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAACATC 166232
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||||||||||| || ||| | || |||||| | |||
Sbjct 166233 CAAAAAGAATCAACCCTCCATTTGGTGTTGAGATTGAGA 166271
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || || || | || || ||||| ||||| | || || ||| || |||
Sbjct 166281 CAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCATCCGAC 166340
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| ||||| || || || ||||||||||| || || || |||
Sbjct 166341 ACCATTGAAAATGTTAAAGCTAAGATCCAAGATAAGGAAGGAATCCCACCAGATCAACAA 166400
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | ||||| || || ||||| | |||||||| | |||||| | ||||| ||| ||
Sbjct 166401 CGATTAATCTTTGCTGGTAAACAATTAGAAGATGGGCGCACTCTTTCTGATTACAACATC 166460
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| |||||||| || || ||| | || |||||| | |||
Sbjct 166461 CAGAAAGAATCCACCCTTCATTTAGTATTGAGATTGAGA 166499
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || |||||| | || |||||||| || || | || || || || ||
Sbjct 166965 CAGATTTTTGTCAAAACTTTGACTGGAAAAACTATTACTTTAGAAGTTGAGCCATCTGAT 167024
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| || || ||||| || |||||||| ||||| || || |||
Sbjct 167025 ACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCAACAA 167084
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| ||||| || |||||||| | |||||| | ||||| || ||
Sbjct 167085 CGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGGCGCACTCTTTCTGATTACAATATC 167144
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || || || | || |||||| | |||
Sbjct 167145 CAAAAGGAATCTACTCTCCACTTGGTATTGAGATTGAGA 167183
Score = 131 bits (144), Expect = 4e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| ||||| | || |||||||| |||||| | || |||||| || ||
Sbjct 167649 CAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTCTGAT 167708
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| || || || ||||| ||||||||||| || || || ||
Sbjct 167709 ACTATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCAACAG 167768
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || ||||| | ||||||||| | || ||| | ||||| || ||
Sbjct 167769 CGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTACAATATC 167828
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
||||| ||||| || |||||| | |||
Sbjct 167829 CAAAAGGAATCCACTCTGCATTTAGTT 167855
>seq412
Length=275653
Score = 138 bits (152), Expect = 3e-27
Identities = 151/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || |||||| | || || || || || || || ||||| || || ||
Sbjct 82792 CAGATCTTTGTTAAAACTTTAACTGGCAAGACCATAACTCTTGAGGTCGAGCCTTCCGAT 82851
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| || |||||||| |||||||| ||||| || ||
Sbjct 82852 ACCATCGAAAATGTCAAGGCTAAGATCCAAGACAAAGAGGGAATCCCACCGGATCAACAG 82911
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| |||||||| ||||||||||| | |||||| | |||||||| |
Sbjct 82912 CGTTTAATTTTCGCGGGAAAACAACTCGAAGATGGGCGCACTCTTTCTGATTATAATATT 82971
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| ||||||||||| |||||
Sbjct 82972 CAGAAAGAATCAACGTTGCAT 82992
>seq62
Length=648032
Score = 118 bits (130), Expect = 3e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 177921 CTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA 177980
||| | || ||||| |||||| | || ||| ||| |||||| | | |||||| ||
Sbjct 445313 CTCTACATCTTCGTAAAAACTTTAACTGGAGAAATCATCACCTTAGGAGTGGAACCTTCT 445372
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
|| ||||| || || || ||| || || || || | ||||||||||| || || |
Sbjct 445373 GATACCATTGAAAATGTTAAAGCTAAAATCCAAGATACGGAAGGAATCCCACCAGATGAA 445432
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
||||| | |||||| | || ||||| || |||||||| | |||||| | ||||| |||
Sbjct 445433 CAACGTTTAATCTTCTCTGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAAC 445492
Query 178101 GTCCAAAAAGAATCAACACTGCA 178123
| |||||||||||||| || ||
Sbjct 445493 ATTCAAAAAGAATCAACCCTCCA 445515
Score = 89.7 bits (98), Expect = 1e-12
Identities = 97/125 (78%), Gaps = 4/125 (3%)
Strand=Plus/Plus
Query 177999 AAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA-CGACTT--ATCTTC 178055
|||| ||| || || |||| ||||||||||| || || || ||| | | || ||||||
Sbjct 445191 AAACTAAA-ATCCAATACAAGGAAGGAATCCCACCAGATCAACAAACAAGTTTAATCTTC 445249
Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115
|| || ||||| || |||||||| | |||||| | ||||| ||| | ||||||||||||
Sbjct 445250 GCTGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAACATTCAAAAAGAATCA 445309
Query 178116 ACACT 178120
|| ||
Sbjct 445310 ACCCT 445314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203622052801938
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |