Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq241 84.2 2e-11 >seq241 Length=949647 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 ||||| || || || || ||||| ||||| || | || || | || || ||||| || Sbjct 165784 TCCTTTTGGATATTGTAATCGGAAAGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAG 165725 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 |||| || |||||||| | || | | ||| |||||| |||||| ||||| Sbjct 165724 ATCAACCGTTGTTGGTCTGGTGGGATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATTT 165665 Query 41792 GACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | |||||| | ||| ||||| | ||| || |||||||| |||| || || ||| Sbjct 165664 TCAATAGTGTCAGATGGCTCGACCTCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACG 165605 Query 41852 AAAATCTGCAT 41862 ||||||||||| Sbjct 165604 AAAATCTGCAT 165594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462263103432400