Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq568 89.7 1e-12 seq224 89.7 1e-12 seq121 89.7 1e-12 seq100 89.7 1e-12 seq78 89.7 1e-12 seq288 87.8 4e-12 >seq568 Length=858451 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 355049 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 355108 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 355109 CCCACGTTGGGC 355120 >seq224 Length=1920887 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 114516 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 114457 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 114456 CCCACGTTGGGC 114445 >seq121 Length=2071819 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 1946512 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1946571 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1946572 CCCACGTTGGGC 1946583 >seq100 Length=669894 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 609869 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 609928 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 609929 CCCACGTTGGGC 609940 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCG-TGGGTTCGA 165767 |||||| ||||||||||||||||||| ||||| ||||||| ||||| ||||||||| Sbjct 537214 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTTGGGTTCGA 537273 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 537274 GCCCCACGTTGGGC 537287 >seq78 Length=461637 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 252181 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 252122 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 252121 CCCACGTTGGGC 252110 >seq288 Length=1860378 Score = 87.8 bits (96), Expect = 4e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 281734 TCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACC 281793 |||| ||||||| ||||| || | ||| ||| |||||| || || ||||||| | Sbjct 75602 TCAGCATCGTGAAAATATATCTCGGACTGGCGGCGTCTTTTCCTCCGGCAAGCCTCGTGC 75661 Query 281794 CAAACTGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCA 281853 | |||||||| || || ||||| |||||||| |||||| | | ||| || | Sbjct 75662 CGAACTGACCGATGGGTTGCAGTAGATTAATATTATTGCTGCCGACGAAGTTCTGCGCGA 75721 Query 281854 GGTTGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAA 281913 |||||| || ||| || || || ||| ||||| || ||||| ||||||||||| Sbjct 75722 GGTTGATTATGGTCGCCATGAGGGACGTCTCGCCGTGATGGTAGGCCGAGTGTTCGGCAA 75781 Query 281914 CATAACCACTGAACTGTGCTACCTTCACGTC 281944 | | || ||||| || || ||||| || Sbjct 75782 CCGATCCCGCCAACTGAGCGACTTTCACCTC 75812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057761939118770