Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq914 140 5e-28 seq121 96.9 5e-15 >seq914 Length=660061 Score = 140 bits (154), Expect = 5e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || || |||||||| || ||| | ||| | |||||| Sbjct 533775 ATGCAAATTTTCGTGAAGACTCTTACTGGCAAAACAATCACTTTGGAGGTCGAAGCATCA 533834 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| | ||| ||||| |||||||| ||||| || ||||| || ||| Sbjct 533835 GACACAATTGAAAATGTCAAAGCAAAAATCCAAGATAAGGAAGGAATCCCACCGGACCAA 533894 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 |||||| | || || || ||||||||| | || || | || || | || || || Sbjct 533895 CAAAGGTTGATCTTCGCTGGAAAACAACTTGAAGACGGCCGCACGCTCTCTGACTACAAC 533954 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| |||||||| |||||||||||| | | || || ||||| || Sbjct 533955 ATTCAAAAGGAATCAACCTTGCATTTGGTTCTTAGGTTGCGTGGTGGCAT 534004 Score = 104 bits (114), Expect = 4e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || || || |||||||| || || | || | |||||| Sbjct 534003 ATGCAAATCTTCGTGAAAACTCTTACTGGCAAAACAATCACATTGGAAGTCGAAGCATCA 534062 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| |||||||| ||||||||||| || || |||||||| Sbjct 534063 GACACCATTGAAAATGTCAAAGCAAAAATTCAGGATAAAGAAGGGATCCCTCCTGATCAG 534122 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| || ||||| || || || || | || || | || || || ||| || ||| Sbjct 534123 CAAAGACTGATTTTCGCGGGCAAGCAGCTTGAAGACGGACGTACCTTGTCAGACTACAAT 534182 Query 124719 ATTCAAAAAGAATCAAC 124735 |||||||| ||||| || Sbjct 534183 ATTCAAAAGGAATCTAC 534199 Score = 100 bits (110), Expect = 4e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || ||||| || || ||| | ||| | ||||| Sbjct 533091 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTGGAGGTGGAAGCTTCG 533150 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| || | ||| ||||| || || || ||||| || || || ||||| Sbjct 533151 GACACAATTGAAAACGTCAAAGCTAAAATCCAGGACAAGGAAGGAATCCCTCCAGATCAG 533210 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || ||||| |||||||| | ||||| | || ||| | || || || Sbjct 533211 CAGCGATTGATCTTTGCCGGAAAACAGCTCGAGGACGGCCGCACACTTTCCGACTACAAC 533270 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| ||| ||||| ||||||| | | || ||||| || Sbjct 533271 ATTCAAAAAGAATCCACTCTGCATCTGGTTTTGAGACTTCGTGGTGGCAT 533320 Score = 96.9 bits (106), Expect = 5e-15 Identities = 164/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || || |||||||| || || | || | ||||| Sbjct 533547 ATGCAAATTTTCGTGAAGACTCTTACTGGCAAAACCATTACATTGGAAGTCGAAGCGTCA 533606 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | || ||||| || || || ||||| || || || ||||| Sbjct 533607 GATACGATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCAGATCAG 533666 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || ||||| |||||||| | ||||| | || || | ||||| || Sbjct 533667 CAGCGATTGATCTTTGCCGGAAAACAGCTCGAGGACGGCCGCACGCTTTCCGATTACAAC 533726 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| || ||||| ||||||||||||||| | | || || ||||| || ||| || Sbjct 533727 ATTCAGAAGGAATCGACTTTGCATTTGGTTCTTAGATTGCGTGGTGGCATGCAAATTT 533784 Score = 91.5 bits (100), Expect = 2e-13 Identities = 163/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || |||||||| || || | || | ||||| Sbjct 533319 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAAACCATTACATTGGAAGTCGAAGCGTCA 533378 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | || ||||| || || || ||||| || || || ||||| Sbjct 533379 GATACGATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCAGATCAG 533438 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || ||||| |||||||| | ||||| | || || | ||||| || Sbjct 533439 CAGCGATTGATCTTTGCCGGAAAACAGCTCGAGGACGGCCGCACGCTTTCCGATTACAAC 533498 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| || ||||| ||||||||||||||| | | || || ||||| || ||| || Sbjct 533499 ATTCAGAAGGAATCGACTTTGCATTTGGTTCTTAGGTTGCGTGGTGGCATGCAAATTT 533556 >seq121 Length=2071819 Score = 96.9 bits (106), Expect = 5e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || |||||||||| ||||||||||| || || | || ||||||| Sbjct 379157 AATGCAAATCTTCGTAAAGACACTGACAGGCAAAACCATCACCCTGGAAGTTGAAGCTTC 379216 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || || || |||| ||||| || || |||||||| || || || || || Sbjct 379217 AGACACCATAGAAAACGTAAAGGCTAAAATCCAGGACAAAGAAGGCATTCCTCCCGACCA 379276 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || | | || || || || ||||| | || ||| | |||| | || ||||| Sbjct 379277 GCAGCGTTTGATCTTCGCTGGCAAACAGCTGGAAGATGGCAGAACCCTTTCCGACTATAA 379336 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || ||||| || | ||||||||| | ||| | |||||||| || Sbjct 379337 CATTCAGAAGGAATCTACGCTCCATTTGGTTCTGCGTCTTCGAGGTGGAAT 379387 Score = 93.3 bits (102), Expect = 6e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | |||||||| || |||||||| || || | || | |||||| Sbjct 379841 AATGCAGATTTTCGTGAAGACACTCACGGGCAAAACCATCACCCTGGAAGTCGAAGCATC 379900 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || || ||| | || ||||| || || ||||||||||| || || || || Sbjct 379901 GGACACCATAGAAAATGTGAAGGCCAAAATCCAGGACAAAGAAGGTATTCCTCCCGACCA 379960 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || | | || ||||| || ||||| | || ||| | |||| | || ||||| Sbjct 379961 GCAGCGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGCAGAACCCTTTCCGACTATAA 380020 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || ||||| || | ||||||||| | ||| | |||||||| || Sbjct 380021 CATTCAGAAGGAATCTACGCTCCATTTGGTTCTGCGTCTTCGAGGTGGAAT 380071 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | |||||||| || |||||||| || || | || | ||||| Sbjct 380753 AATGCAGATTTTCGTGAAGACACTCACGGGCAAAACCATCACCCTGGAAGTCGAAGCGTC 380812 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || || ||| | || ||||| || || ||||||||||| || || || || Sbjct 380813 GGACACCATAGAAAATGTGAAGGCCAAAATCCAGGACAAAGAAGGTATTCCTCCCGACCA 380872 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || | | || || || || ||||| | || ||| | |||| | || ||||| Sbjct 380873 GCAGCGTTTGATCTTCGCTGGCAAACAGCTGGAAGATGGCAGAACCCTTTCCGACTATAA 380932 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || ||||| || | ||||||||| | ||| | |||||||| || Sbjct 380933 CATTCAGAAGGAATCTACGCTCCATTTGGTTCTGCGTCTTCGAGGTGGAAT 380983 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | |||||||| || |||||||| || || | || | ||||| Sbjct 381209 AATGCAGATTTTCGTGAAGACACTCACGGGCAAAACCATCACCCTGGAAGTCGAAGCGTC 381268 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || || ||| | || ||||| || || ||||||||||| || || || || Sbjct 381269 GGACACCATAGAAAATGTGAAGGCCAAAATCCAGGACAAAGAAGGTATTCCTCCCGACCA 381328 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || | | || || || || ||||| | || ||| | |||| | || ||||| Sbjct 381329 GCAGCGTTTGATCTTCGCTGGCAAACAGCTGGAAGATGGCAGAACCCTTTCCGACTATAA 381388 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || ||||| || | ||||||||| | ||| | |||||||| || Sbjct 381389 CATTCAGAAGGAATCTACGCTCCATTTGGTTCTGCGTCTTCGAGGTGGAAT 381439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755412759587200