Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq121 104 3e-17 seq914 91.5 2e-13 >seq121 Length=2071819 Score = 104 bits (114), Expect = 3e-17 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||||| ||| | | |||| ||| | |||||||| || || ||||| || | Sbjct 379158 TTCCACCTCGAAGACGCAGAACCAGATGGAGCGTAGATTCCTTCTGGATGTTATAGTCGG 379099 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| ||||||| ||| || | ||| || ||||||||||||| | |||||||| || | Sbjct 379098 AAAGGGTTCTGCCATCTTCGAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCTGGCG 379039 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 ||||||||||||| || || || || ||| ||| | Sbjct 379038 GAATTCCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCTATGGTGTCGGAAGCTTCGA 378979 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 |||| || || || ||||||||||| | ||||| | ||| || |||||| Sbjct 378978 CTTCAAGAGTAATGGTTTTACCTGTGAGCGTTTTCACGAAGATCTGCATT 378929 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||||| ||| | | |||| ||| | ||||||||||| || || || || | Sbjct 379842 TTCCACCTCGAAGACGCAGAACCAGATGGAGCGTAGATTCTTTCTGAATGTTGTAGTCGG 379783 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| ||||||| ||| || | ||||| ||||| || ||||| | ||||| || |||| Sbjct 379782 AAAGGGTTCTGCCATCTTCCAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGAG 379723 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| |||||||| || || Sbjct 379722 GAATGCCTTCTTTGTCCTG 379704 >seq914 Length=660061 Score = 91.5 bits (100), Expect = 2e-13 Identities = 155/230 (67%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCT 146107 ||||||||||||| | | ||| | ||| | |||||||| ||| || ||||| || ||| Sbjct 534231 TTCCACCTCTAAGGCGAAGTACAAGATGAAGTGTAGATTCCTTTTGA-ATATTGTAGTCT 534173 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 || | || | | || || | || || || || ||||||| |||||||||||| ||| Sbjct 534172 GACAAGGTACGTCCGTCTTCAAGCTGCTTGCCCGCGAAAATCAGTCTTTGCTGATCAGGA 534113 Query 146168 GGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCT 146227 || || ||||||||||| || || ||||| ||| Sbjct 534112 GGGATCCCTTCTTTATCCTGAATTTTTGCTTTGACATTTTCAATGGTGTCTGATGCTTCG 534053 Query 146228 ACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||||| | |||||||||||| || || | ||||| | ||| |||||||| Sbjct 534052 ACTTCCAATGTGATTGTTTTGCCAGTAAGAGTTTTCACGAAGATTTGCAT 534003 Score = 87.8 bits (96), Expect = 3e-12 Identities = 93/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 146069 ACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATC 146127 |||||||| || || ||||| ||| || || || || || || || || | || || || Sbjct 533983 ACCAAATGCAAGGTTGATTCCTTTTGA-ATGTTGTAGTCAGAGAGCGTGCGGCCGTCTTC 533925 Query 146128 TAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | |||||||||||| || ||||| ||||| || ||||| || |||||||| |||||||| Sbjct 533924 AAGTTGTTTTCCAGCGAAGATCAACCTTTGTTGGTCCGGTGGGATTCCTTCCTTATCTTG 533865 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 |||||||| ||||| || || || || || ||||| ||||| || | || || || Sbjct 533071 ACCAAATGCAAAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGGCCGTCCTCG 533012 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 | ||||||||||| || ||||||| |||||||| || || |||||||| || ||||| Sbjct 533011 AGCTGTTTTCCAGCGAAGATCAATCGCTGCTGATCTGGGGGGATTCCTTCCTTGTCTTG 532953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743483842407680