Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq12 100 6e-16 seq132 86.0 1e-11 >seq12 Length=2145831 Score = 100 bits (110), Expect = 6e-16 Identities = 131/179 (73%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 ||||| || |||||| || | |||||||||||||| |||| ||||| | |||||| Sbjct 1206693 TGTCCTCCATTCAAGATCATCATCCTGGACGAGGCAGACAGTATGACCGGTACCGCGCAA 1206752 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTC-CGTTGTGACGCGTTTTTGCCTGGTGTG 254320 | || || || |||| ||||||| | | | | || || |||||||||||||| || Sbjct 1206753 ACGGCACTTCGTCGAATCATGGAGAAGGAGGCGCACAGT-ACACGTTTTTGCCTGGTCTG 1206811 Query 254321 CAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||| || ||||| ||||||| ||| | || || || ||| ||||||| || |||| Sbjct 1206812 CAATTATCTGTCGCGGATCATCAAGCCGATCGCGTCGCGCTGCACCAAGTTCCGGTTCA 1206870 >seq132 Length=3977268 Score = 86.0 bits (94), Expect = 1e-11 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 248800 TACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTC 248859 |||| || |||||| | || ||| | | | ||||| ||||| |||| || || Sbjct 1025326 TACGACAGAGATTTCAATTATAATTACATCGGCTTCAAGACGCTCGAGACGAGTTACCTG 1025385 Query 248860 CTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTC 248919 || || ||| | |||||||| || ||| | || || ||| ||||| ||||||| || Sbjct 1025386 CTAAAGATTAACGGCAAGATAGTAGAAAGGCCGCAACAAATGCTGATGAGAGTGGCCGTT 1025445 Query 248920 GGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGC 248979 || |||||| || | || || |||| | | |||||||| | | || ||||| Sbjct 1025446 GGCATTCACGAGAACGATATCGAGAAGGCTATAGAGACGTATAACTATTTGTCCGAACGA 1025505 Query 248980 TGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACC 249021 | | || || ||| | || ||||||||||||||| ||||| Sbjct 1025506 TATTTTACGCACGCCTCGCCAACGCTCTTCAACGCCTGTACC 1025547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073703403803072