Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq914 86.0 5e-12 seq121 84.2 2e-11 >seq914 Length=660061 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 18111 CTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAA 18170 ||||| |||| || | |||||||| ||||||||||||||||| | | || | Sbjct 533989 CTAAGAACCAAATGCAAGGTTGATTCCTTTTGAATGTTGTAGTCAGAGAGCGTGCGGCCG 533930 Query 18171 TCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTA 18230 ||||| | |||||| || || |||| | |||||||| ||| || | ||||||||| Sbjct 533929 TCTTCAAGTTGTTTTCCAGCGAAGATCAACCTTTGTTGGTCCGGTGGGATTCCTTCCTTA 533870 Query 18231 TCGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || |||| |||||| ||| | | ||| ||||| | ||| || | ||||| Sbjct 533869 TCTTGGATTT-TTGCTTTGACATTTTCAATTGTGTCTGATGCTTCGACCTCCAAAGTGAT 533811 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||||| || | || || || ||||||||||| Sbjct 533810 TGTTTTGCCAGTAAGAGTCTTCACGAAAATTTGCAT 533775 >seq121 Length=2071819 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | || |||| || || || |||||||| |||||||||||||||| Sbjct 379841 TCCACCTCGAAGACGCAGAACCAGATGGAGCGTAGATTCTTTCTGAATGTTGTAGTCGGA 379782 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| | | |||||||| |||||||| || |||| | | || || || || Sbjct 379781 AAGGGTTCTGCCATCTTCCAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGAGG 379722 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | |||||| || || |||| ||| || | | | | ||||| | ||| Sbjct 379721 AATGCCTTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTGTCCGACGCTTCGAC 379662 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | ||||||| ||||||| || | ||| || || ||||| |||||| Sbjct 379661 TTCCAGGGTGATGGTTTTGCCCGTGAGTGTCTTCACGAAAATCTGCATT 379613 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTC-TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||||| || |||| |||| || | ||||||||| || ||||| || ||||||||||||| Sbjct 381664 CCTCCACGAAGTCGTAAG-ACTAAGTGAAGTGTGGACTCTTTCTGGATGTTGTAGTCGGA 381606 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| | | |||||||| ||||| || || |||| | | || || || || Sbjct 381605 AAGGGTTCTGCCATCTTCCAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCGGGAGG 381546 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| || || |||| ||| || | | | | ||||| | ||| Sbjct 381545 AATACCTTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTGTCCGACGCTTCGAC 381486 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | ||||||| ||||||| || | ||| || || ||||| |||||| Sbjct 381485 TTCCAGGGTGATGGTTTTGCCCGTGAGTGTCTTCACGAAAATCTGCATT 381437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379322830115355