Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq542 105 1e-17 seq921 102 1e-16 seq132 89.7 7e-13 >seq542 Length=247308 Score = 105 bits (116), Expect = 1e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 79306 TCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATG 79365 ||||||| |||| || | |||||||| ||||| ||||||| || || ||||| | | Sbjct 50107 TCATAAGTACCTTTCTCAGCAGCTAATTCGCAACTAGCCTCTAGAGCACCATAATACAGG 50166 Query 79366 GTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAG 79425 |||||||| || | ||||||| || | || ||| ||| ||||||||||| | | Sbjct 50167 GTTTCGAAGATTTGAATATTGAGTTCCTTAGCATCTTTGCTCTCAAATGGATACCTCATT 50226 Query 79426 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACC 79463 | || || || |||||||||||||| || |||||||| Sbjct 50227 AAGATGAATGCATCTGCTAATCCTTGTACGCCAATACC 50264 >seq921 Length=431717 Score = 102 bits (112), Expect = 1e-16 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 49757 TATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATG 49816 || ||| |||| |||||| ||| || | |||||| || || |||||||| || || | Sbjct 294440 TACAAACCTTTTCAAATCCTAATGCAACGAACAATCTGTCTGCAACAAATTCAATGTAAG 294381 Query 49817 TTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATT 49876 | ||| | | ||||||||||||||| |||| |||||| | ||| | || | |||| Sbjct 294380 TACACATGAGTGTACAATTCATTCCTATCAGTTCAACTGGCAACGCCTCTGTTAAGAATT 294321 Query 49877 CTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGG-- 49934 ||| ||| || || ||||| |||| || ||| | ||| ||| || ||| Sbjct 294320 CTTTTTCGATTTCCACAGCATCCATTATTATTGATTTTACG---CGCTCAAACGTTGGCT 294264 Query 49935 -ATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 49984 || | | |||||||||||| |||||||| |||||||| || | |||| Sbjct 294263 TTTGTATAATATGTTTAAACATTAAACATGCAAAATCGCAATGTAATCCCT 294213 >seq132 Length=3977268 Score = 89.7 bits (98), Expect = 7e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 80678 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAA 80737 ||||||| || || ||||||||||||| ||| || || | |||| || ||||| | Sbjct 1025127 CACTAAAGCTCTTCTTGGTTTCCTTGTGTAAATTAGACACATCAATTCGTGCCGCTAATA 1025068 Query 80738 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 80797 | || ||||| ||||| | || | |||||| || ||||| ||||| ||| | |||| Sbjct 1025067 TTGCGTAATCAGGATGATTAGTTGCCATAGTGGCCGCAATTTCAGCTGCAAGATTATCCA 1025008 Query 80798 ATTCTACCGTTGTTACTCCATTATATA 80824 || | || || ||||||||| ||||| Sbjct 1025007 ATGCGACTGTAGTTACTCCAGAATATA 1024981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718227688089560