Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 4e-13 seq914 84.2 2e-11 >seq6 Length=1016685 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/195 (71%), Gaps = 9/195 (5%) Strand=Plus/Minus Query 18852 CCTTT-TGAATATTGTAATCCGCCATTGTTTTGGCGTCC----TCCAGCTGTTTACCCGC 18906 ||||| || ||||||||||||| | ||| |||||| ||||| ||||| || || Sbjct 447903 CCTTTCTGGATATTGTAATCCGAAAGTGT----GCGTCCATCTTCCAGTTGTTTGCCGGC 447848 Query 18907 ATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTAC 18966 | ||||||| | ||||||||| ||| | |||||| ||||| || || ||| || Sbjct 447847 AAAAATAAGCCGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTCAC 447788 Query 18967 CTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTT 19026 | | | |||||| || ||| |||| ||||||||| ||||| || | ||||| Sbjct 447787 ATTTTCAATGGTATCGGAAGCCTCTACCTCGAGGGTAATGGTCTTACCCGTGAGGGTTTT 447728 Query 19027 GACAAAAATTTGCAT 19041 ||||| || ||||| Sbjct 447727 CACAAAGATCTGCAT 447713 >seq914 Length=660061 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || || |||||||| | |||| ||||| || || ||||| ||||| |||||||| | Sbjct 533545 CCACCACGCAACCTAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTGTAATCGGAA 533486 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | || | ||||||| |||||||| || ||| | || | || ||||||||| || Sbjct 533485 AGCGTGCGGCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAATCGCTGCTGATCTGGAGGG 533426 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGT- 18993 | || || ||||| ||||| || || | ||| ||||| | ||| || Sbjct 533425 ATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATCGTATCTG-ACGCTTCGAC 533367 Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||| | ||||||||||| || || | ||| ||||| || || ||||| Sbjct 533366 TTCCAATGTAATGGTTTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 533319 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || || ||||| || | |||| ||||| || || ||||| ||||| |||||||| | Sbjct 533773 CCACCACGCAATCTAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTGTAATCGGAA 533714 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | || | ||||||| |||||||| || ||| | || | || ||||||||| || Sbjct 533713 AGCGTGCGGCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAATCGCTGCTGATCTGGAGGG 533654 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGT- 18993 | || || ||||| ||||| || || | ||| ||||| | ||| || Sbjct 533653 ATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATCGTATCTG-ACGCTTCGAC 533595 Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||| | ||||||||||| || || | ||| || || ||||||||||| Sbjct 533594 TTCCAATGTAATGGTTTTGCCAGTAAGAGTCTTCACGAAAATTTGCAT 533547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414549664117126