Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq921 98.7 9e-16 >seq921 Length=431717 Score = 98.7 bits (108), Expect = 9e-16 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 12956 TTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATT 13015 |||| | | |||||| | | ||||||||||| |||||||| || ||||| ||| Sbjct 294432 TTTTCAAATCCTAATGCAACGAACAATCTGTCTGCAACAAATTCAATGTAAGTACACATG 294373 Query 13016 AAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCT 13075 | ||| ||||||||||| | || || |||| || |||||||| || | |||||| Sbjct 294372 AGTGTACAATTCATTCCTATCAGTTCAACTGGCAACGCCTCTGTTAAGAATTCTTTTTCG 294313 Query 13076 ATATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT--- 13132 || || || || || || | ||| | | ||||| ||| || | || ||| | Sbjct 294312 ATTTCCACAGCATCCATTATTAT---TGATTTTACGCGCTCAAACGTTGGCTTTTGTATA 294256 Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCC 13173 | ||| |||||||| | |||||||||||| || || ||||| Sbjct 294255 ATATGTTTAAACATTAAACATGCAAAATCGCAATGTAATCC 294215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430958348353758