Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq914 179 9e-40 seq121 178 3e-39 seq921 93.3 1e-13 >seq914 Length=660061 Score = 179 bits (198), Expect = 9e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| ||||| || | |||||| ||||| | ||||||||| || |||||||| ||||| | Sbjct 534231 TTCCACCTCTAAGGCGAAGTACAAGATGAAGTGTAGATTCCTTTTGAATATTGTAGTCTG 534172 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 | | || | |||||||| || || || || || ||||| || || || |||||||||| Sbjct 534171 ACAAGGTACGTCCGTCTTCAAGCTGCTTGCCCGCGAAAATCAGTCTTTGCTGATCAGGAG 534112 Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTA 104510 | || ||||||||||||||||| |||||||| |||||||| | ||| || | ||| | Sbjct 534111 GGATCCCTTCTTTATCCTGAATTTTTGCTTTGACATTTTCAATGGTGTCTGATGCTTCGA 534052 Query 104511 CCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || | ||| || || || |||||||| ||||| || || || ||||| Sbjct 534051 CTTCCAATGTGATTGTTTTGCCAGTAAGAGTTTTCACGAAGATTTGCAT 534003 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 104344 CCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACC 104403 |||||| || | ||| || || ||||| || ||||| || |||||||| || || | || Sbjct 533990 CCTAAGAACCAAATGCAAGGTTGATTCCTTTTGAATGTTGTAGTCAGAGAGCGTGCGGCC 533931 Query 104404 GTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTT 104463 |||||| |||||||||||||| || || | ||| ||||| || || || |||||||| || Sbjct 533930 GTCTTCAAGTTGTTTTCCAGCGAAGATCAACCTTTGTTGGTCCGGTGGGATTCCTTCCTT 533871 Query 104464 ATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAAT 104523 ||| || || |||||||| |||||||| | || || | ||| ||||| | || || Sbjct 533870 ATCTTGGATTTTTGCTTTGACATTTTCAATTGTGTCTGATGCTTCGACCTCCAAAGTGAT 533811 Query 104524 AGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || |||||||| || || || || || ||||| Sbjct 533810 TGTTTTGCCAGTAAGAGTCTTCACGAAAATTTGCAT 533775 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 |||| ||| || | ||| || || || || ||||| || || || || || || || | Sbjct 533080 AGCCGAAGAACCAAATGCAAAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGG 533021 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || ||||||||||| || || | | ||| ||||| || || |||||||| Sbjct 533020 CCGTCCTCGAGCTGTTTTCCAGCGAAGATCAATCGCTGCTGATCTGGGGGGATTCCTTCC 532961 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || || || || ||||| || || ||||| | || || || || || || || || Sbjct 532960 TTGTCTTGGATTTTTGCCTTCACGTTTTCAATCGTGTCCGAAGCCTCAACTTCAAGGGTT 532901 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || | || || || || |||||||| Sbjct 532900 ATGGTTTTCCCCGTCAACGTCTTCACGAAAATCTGCAT 532863 >seq121 Length=2071819 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | || || ||||| | |||||||| ||||| || |||||||| Sbjct 379159 ATTCCACCTCGAAGACGCAGAACCAGATGGAGCGTAGATTCCTTCTGGATGTTATAGTCG 379100 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||| ||||| || ||||||||||| || | ||| ||||| || Sbjct 379099 GAAAGGGTTCTGCCATCTTCGAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCTGGC 379040 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| ||||| || || || || ||||| |||| ||| ||| || ||| Sbjct 379039 GGAATTCCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCTATGGTGTCGGAAGCTTCG 378980 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || ||||| || ||||| || || ||||| || || ||||||||| Sbjct 378979 ACTTCAAGAGTAATGGTTTTACCTGTGAGCGTTTTCACGAAGATCTGCATT 378929 Score = 176 bits (194), Expect = 1e-38 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | || || ||||| | |||||||| ||||| || |||||||| Sbjct 378931 ATTCCACCTCGCAGACGCAGAACCAGATGAAGAGTAGATTCCTTCTGGATGTTATAGTCG 378872 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || ||||| |||||||| ||||| || || || | || ||||||||| Sbjct 378871 GAGAGAGTTCTGCCATCTTCGAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCAGGA 378812 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || |||||||| || || ||||| |||| ||| || || ||| Sbjct 378811 GGAATGCCTTCCTTGTCTTGAATCTTGGCCTTGACATTCTCTATGGTGTCAGAAGCTTCG 378752 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| ||||| |||||||| ||||| || || || ||||| Sbjct 378751 ACTTCAAGGGTAATGGTCTTCCCAGTAAGAGTTTTCACGAAGATTTGCAT 378702 Score = 150 bits (166), Expect = 4e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | || || ||||| | ||||||||||||||||| || ||||| Sbjct 379843 ATTCCACCTCGAAGACGCAGAACCAGATGGAGCGTAGATTCTTTCTGAATGTTGTAGTCG 379784 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||| || ||||| ||||| || || | | ||| || || ||| Sbjct 379783 GAAAGGGTTCTGCCATCTTCCAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGA 379724 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| ||||| || || || || |||||||||| ||| || | ||| Sbjct 379723 GGAATGCCTTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTGTCCGACGCTTCG 379664 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || || || || ||||| || || || ||||||||| Sbjct 379663 ACTTCCAGGGTGATGGTTTTGCCCGTGAGTGTCTTCACGAAAATCTGCATT 379613 >seq921 Length=431717 Score = 93.3 bits (102), Expect = 1e-13 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 268829 GAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTT 268888 || |||||| || |||||| | |||| ||||| ||||| | | || ||||| || Sbjct 293494 GACGAAAGATATTTCATATCTCACGTTCTAGCGTTCTTTGCGGCTTCCGACGGTATTGTC 293553 Query 268889 AACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTT 268948 || || |||||| | || | || ||||||| || | || | || || | || || Sbjct 293554 AATGAGAATCTAATTGAAAGATTTAGTCAAGAAGTGAAAATCGCAGAGGCACGCTGCTTC 293613 Query 268949 TACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGAT 269008 || || |||||||| || || || ||||||||||| || ||||| ||| | || || Sbjct 293614 TATGGTTTCCAGATTGCCATCGAGAATATTCATTCTGAAATGTATTCTCTGCTCATTGAA 293673 Query 269009 ACTTATATAGATGATAACAACGAAAAGAAAA 269039 |||||||| |||| || |||||| ||| Sbjct 293674 ACTTATATCTCTGATCCGAAAGAAAAGTAAA 293704 Score = 87.8 bits (96), Expect = 4e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 268694 CCAGATAGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAG 268753 ||| || | ||||| || || || || || || |||||| ||| ||||||||| || Sbjct 293212 CCAAATCGCTTTGTAATTTTCCCTATTCAATATCCTGATATTTGGGACATGTACAAAAAG 293271 Query 268754 GCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCT 268791 ||||| ||||| |||||||||||||||||||||| ||| Sbjct 293272 GCCGTGGCTTCCTTTTGGACTGTAGAAGAAGTAGCTCT 293309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151330849254932