Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq121 93.3 4e-14 seq914 87.8 2e-12 >seq121 Length=2071819 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| ||||| ||||||||| ||| || || |||||||| || | Sbjct 381664 CCTCCACGAAGTCGTAAGACTAAGTGAAGTGTGGACTCTTTCTGGATGTTGTAGTCGGAA 381605 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || | || |||||||| ||||| || | || ||||||||||| || || Sbjct 381604 AGGGTTCTGCCATCTTCCAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCGGGAGGA 381545 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | || ||| |||||| ||||| ||| | | ||||||| || | | || || | Sbjct 381544 ATACCTTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTGTCCGACG-CTTCGAC 381486 Query 48680 T-CGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | | | || |||||||| || ||||| || ||||| ||||||||||| Sbjct 381485 TTCCAGGGTGATGGTTTTGCCCGTGAGTGTCTTCACGAAAATCTGCAT 381438 >seq914 Length=660061 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || || |||||||| | || ||||| | || ||||| |||||||||||||| | Sbjct 533545 CCACCACGCAACCTAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTGTAATCGGA- 533487 Query 48560 AATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || || ||||||| ||||| || ||| | | || || ||||||||||| || Sbjct 533486 AAGCGTGCGGCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAATCGCTGCTGATCTGGAGG 533427 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | |||||||||| ||||| ||||| | | || ||||| | | || || Sbjct 533426 GATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATCGTATCTG-ACGCTTCGA 533368 Query 48679 C-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | || | ||| |||||||| || || ||||| || || || |||||||| Sbjct 533367 CTTCCAATGTAATGGTTTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 533319 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || || ||||| || | || ||||| | || ||||| |||||||||||||| | Sbjct 533773 CCACCACGCAATCTAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTGTAATCGGA- 533715 Query 48560 AATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || || ||||||| ||||| || ||| | | || || ||||||||||| || Sbjct 533714 AAGCGTGCGGCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAATCGCTGCTGATCTGGAGG 533655 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | |||||||||| ||||| ||||| | | || ||||| | | || || Sbjct 533654 GATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATCGTATCTG-ACGCTTCGA 533596 Query 48679 C-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | || | ||| |||||||| || || ||||| ||||| ||||| ||||| Sbjct 533595 CTTCCAATGTAATGGTTTTGCCAGTAAGAGTCTTCACGAAAATTTGCAT 533547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421227691418579