Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1897 123 1e-23 seq739 118 6e-22 seq145 105 3e-18 seq164 89.7 3e-13 seq551 87.8 9e-13 >seq1897 Length=38326 Score = 123 bits (136), Expect = 1e-23 Identities = 94/109 (86%), Gaps = 6/109 (6%) Strand=Plus/Plus Query 11425 AGGGAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACC 11484 || ||||||| || |||||||||| || |||||||||| |||||||||| ||||| Sbjct 24539 AGAGAAATATTAAA--AATAAAAAATTAA--TGGCCCATGAGGGGATCGAACCCGCGACC 24594 Query 11485 TTCGCGTTATTAGCACGA--CGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct 24595 TTCGCGTTATTAGCACGACGCGCTCTAACCAACTGAGCTAATGGGCCGT 24643 >seq739 Length=467542 Score = 118 bits (130), Expect = 6e-22 Identities = 80/89 (90%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| | Sbjct 215405 AAATATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAA 215464 Query 11511 CCAACTGAGCTAATGGGCCGTCGACGATT 11539 |||||||||||||||||||| | ||||| Sbjct 215465 CCAACTGAGCTAATGGGCCGCTGTCGATT 215493 Score = 113 bits (124), Expect = 2e-20 Identities = 80/90 (89%), Gaps = 3/90 (3%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| || ||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 199652 AACAAAAAA--AACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 199709 Query 11501 GACG-CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||| |||||||||||||||||||| Sbjct 199710 GACGCCTCTAACCAACTGAGCTAATGGGCC 199739 >seq145 Length=3617616 Score = 105 bits (116), Expect = 3e-18 Identities = 86/103 (83%), Gaps = 8/103 (8%) Strand=Plus/Minus Query 11431 ATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCG 11490 ||||| || ||||||||| | |||||||||| |||||||||| ||||||||||| Sbjct 2466597 ATATAAAAA-AATAAAAAAGAA---TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCG 2466542 Query 11491 TTATTAGCACGAC----GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| ||||| |||||||||||||||||||| Sbjct 2466541 TTATTAGCACGACGCTCGCTCTAACCAACTGAGCTAATGGGCC 2466499 >seq164 Length=484908 Score = 89.7 bits (98), Expect = 3e-13 Identities = 70/82 (85%), Gaps = 4/82 (5%) Strand=Plus/Plus Query 11425 AGGGAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACC 11484 || ||||||| || |||||||||| || |||||||||| |||||||||| ||||| Sbjct 438747 AGAGAAATATTAAA--AATAAAAAATTAA--TGGCCCATGAGGGGATCGAACCCGCGACC 438802 Query 11485 TTCGCGTTATTAGCACGACGCT 11506 |||||||||||||||||||||| Sbjct 438803 TTCGCGTTATTAGCACGACGCT 438824 >seq551 Length=559545 Score = 87.8 bits (96), Expect = 9e-13 Identities = 69/81 (85%), Gaps = 4/81 (5%) Strand=Plus/Plus Query 11425 AGGGAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACC 11484 || ||||||| || |||||||||| || |||||||||| |||||||||| ||||| Sbjct 158063 AGAGAAATATTAAA--AATAAAAAATTAA--TGGCCCATGAGGGGATCGAACCCGCGACC 158118 Query 11485 TTCGCGTTATTAGCACGACGC 11505 ||||||||||||||||||||| Sbjct 158119 TTCGCGTTATTAGCACGACGC 158139 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261476607075004