Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq267 197 2e-46 seq193 190 3e-44 seq571 185 1e-42 seq62 179 6e-41 >seq267 Length=786524 Score = 197 bits (218), Expect = 2e-46 Identities = 175/219 (80%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| |||||||||||||| ||||||||||| ||||| ||||||||||| || ||||| Sbjct 490889 TCTTCGTGATAACATCCAAGGTATCACCAAGCCGGCTATTCGTCGTCTGGCGCGACGTGG 490830 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || |||||| | || || || |||| ||||| | ||||| ||| ||||| | || Sbjct 490829 CGGTGTGAAGCGTATTTCCGGTCTGATCTACGAAGAAACTCGTGGTGTACTGAAGGTATT 490770 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 |||| ||| |||||||| |||||| || ||| ||||||||||| || | ||||| || Sbjct 490769 CCTCGAGAACGTTATCCGCGATGCTGTCACCTACACCGAGCACGCCAAGAGGAAGACCGT 490710 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| ||||||| |||| || || |||||||| ||||| Sbjct 490709 AACCGCCATGGACGTCGTATACGCCTTGAAACGCCAAGG 490671 >seq193 Length=191000 Score = 190 bits (210), Expect = 3e-44 Identities = 204/270 (76%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||| | | | ||| || ||||| ||||| || |||||||| ||||| || Sbjct 840 GCGAAGCGCCATAGGAAAGTTCTGCGTGATAATATCCAGGGTATCACCAAACCAGCCATT 781 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| ||||| | |||||||| |||||||| ||||||| ||| |||| ||||| | Sbjct 780 CGTCGATTGGCTAGACGTGGTGGCGTCAAGCGAATCTCTGGCTTGATCTACGAAGAAACA 721 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || || ||| ||||||| | | ||||| | |||||| | || |||||| Sbjct 720 CGAGGCGTGTTAAAGGTCTTCCTTGAAAATGTTATTCGTGATGCGGTTACGTACACCGAG 661 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || ||| | |||||||| || |||||||| ||||||| || |||||||||||||| Sbjct 660 CATGCGAAAAGGAAGACTGTAACAGCCATGGATGTCGTCTACGCGCTGAAACGTCAAGGC 601 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 | | ||||||| |||||| |||||||| Sbjct 600 AGAACTCTTTATGGATTTGGAGGTTAATCT 571 >seq571 Length=260474 Score = 185 bits (204), Expect = 1e-42 Identities = 191/250 (76%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || ||||| ||||| || |||||||| ||||| || ||||| ||||| | ||||| Sbjct 194306 TCTGCGTGATAATATCCAGGGTATCACCAAACCAGCCATTCGTCGATTGGCTAGACGTGG 194365 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| |||||||| ||||||| ||| |||| ||||| | || | || || ||| |||| Sbjct 194366 TGGCGTCAAGCGAATCTCTGGCTTGATCTACGAAGAAACACGAGGCGTGTTAAAGGTCTT 194425 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 |||| | | ||||| | |||||| | || |||||||| || ||| | |||||||| Sbjct 194426 CCTCGAAAATGTTATTCGTGATGCGGTTACGTACACCGAGCATGCCAAAAGGAAGACTGT 194485 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || |||||||| ||||||| || |||||||||||||| | | |||| || ||||| Sbjct 194486 AACAGCCATGGATGTCGTCTACGCGCTGAAACGTCAAGGCAGAACTCTTTACGGATTTGG 194545 Query 16693 AAGTTAATCT 16702 | |||||||| Sbjct 194546 AGGTTAATCT 194555 >seq62 Length=1213647 Score = 179 bits (198), Expect = 6e-41 Identities = 200/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||| | | ||| || ||||| ||||| || |||||||| ||||| || Sbjct 78228 GCGAAGCGTCATAGGAAGGTTCTGCGTGATAATATCCAGGGTATCACCAAACCAGCCATT 78169 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| | ||| | |||||||| |||||||| ||||||| ||| |||| || || | | Sbjct 78168 CGTCGATTAGCTAGACGTGGTGGCGTCAAGCGAATCTCTGGCTTGATCTACGAGGAAACT 78109 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| || ||| |||||||| | | ||||| | |||||| | || || ||| Sbjct 78108 CGAGGTGTATTAAAGGTCTTCCTCGAAAATGTTATTCGTGATGCAGTTACGTACACTGAG 78049 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || |||||| | |||||||| || ||||||| |||||||||| |||||||||||||| Sbjct 78048 CATGCTAAAAGGAAGACTGTGACAGCCATGGACGTCGTCTATGCCCTGAAACGTCAAGGC 77989 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | ||||| ||||| ||||| Sbjct 77988 AGAACTCTATATGGATTTGGTGGTTAA 77962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79071013388247