Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq921 98.7 1e-15 seq542 93.3 5e-14 seq132 86.0 8e-12 >seq921 Length=431717 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33101 TATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATG 33160 || ||| |||| |||||| ||| || | |||||| || || || ||||| || || | Sbjct 294440 TACAAACCTTTTCAAATCCTAATGCAACGAACAATCTGTCTGCAACAAATTCAATGTAAG 294381 Query 33161 TTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATT 33220 | ||| | | ||||||||||||||| |||| |||||| | ||| | || | |||| Sbjct 294380 TACACATGAGTGTACAATTCATTCCTATCAGTTCAACTGGCAACGCCTCTGTTAAGAATT 294321 Query 33221 CTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGG-- 33278 ||| ||| || || ||||| |||| || ||| | ||| ||| || ||| Sbjct 294320 CTTTTTCGATTTCCACAGCATCCATTATTATTGATTTTACG---CGCTCAAACGTTGGCT 294264 Query 33279 -ATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 33328 || | | |||||||||||| |||||||| |||||||| || | |||| Sbjct 294263 TTTGTATAATATGTTTAAACATTAAACATGCAAAATCGCAATGTAATCCCT 294213 >seq542 Length=247308 Score = 93.3 bits (102), Expect = 5e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 62602 CAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTAT 62661 |||||| ||| ||||| ||||||| ||||| ||||| | |||||||||||| | ||| Sbjct 50126 CAGCTAATTCGCAACTAGCCTCTAGAGCACCATAATACAGGGTTTCGAAGATTTGAATAT 50185 Query 62662 TTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTA 62721 | || || | || || ||| ||||||||||| | | | || || || || |||| Sbjct 50186 TGAGTTCCTTAGCATCTTTGCTCTCAAATGGATACCTCATTAAGATGAATGCATCTGCTA 50245 Query 62722 ATCCTTGAACACCAATACC 62740 ||||||| || |||||||| Sbjct 50246 ATCCTTGTACGCCAATACC 50264 >seq132 Length=3977268 Score = 86.0 bits (94), Expect = 8e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 63955 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 64014 ||||||| || || ||||||||||||| ||| || || | |||| || |||| | Sbjct 1025127 CACTAAAGCTCTTCTTGGTTTCCTTGTGTAAATTAGACACATCAATTCGTGCCGCTAATA 1025068 Query 64015 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64074 | || ||||| ||||| | || | |||||| || ||||| ||||| ||| | |||| Sbjct 1025067 TTGCGTAATCAGGATGATTAGTTGCCATAGTGGCCGCAATTTCAGCTGCAAGATTATCCA 1025008 Query 64075 ATTCTACCGTTGTTACTCCATTATATA 64101 || | || || ||||||||| ||||| Sbjct 1025007 ATGCGACTGTAGTTACTCCAGAATATA 1024981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622911544059640