Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq921 242 2e-59 seq48 136 3e-27 seq386 125 5e-24 seq914 120 2e-22 seq6 95.1 8e-15 seq121 93.3 3e-14 >seq921 Length=431717 Score = 242 bits (268), Expect = 2e-59 Identities = 323/447 (72%), Gaps = 4/447 (1%) Strand=Plus/Plus Query 6158 CACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAAT 6217 ||||||||||| | |||| || || || ||||| || || |||||||| ||||| || Sbjct 287493 CACGATGGGGAGCGTGAATGTTAACCGCAATGTCAGTGATGCCTTCTACCGTTACAAGAT 287552 Query 6218 GCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAA 6277 |||||| || || || || ||||| |||||||| || || ||||| || ||||| || Sbjct 287553 GCCGCGGATTCAAGCAAAAGTGGAGGGCAAGGGAAATGGCATCAAAACGGTAATTGTTAA 287612 Query 6278 CATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGG 6337 |||| || || || |||||| |||| || || ||||| || || || ||||| ||||| Sbjct 287613 CATGGTGGACGTAGCAAAGGCGATCGGCCGTCCAGCCACATATCCAACCAAATACTTCGG 287672 Query 6338 GTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGG 6397 |||||||| || || |||||||| || || ||| ||||| ||||| ||||||||||| Sbjct 287673 CTGCGAACTGGGTGCACAGACGCAATTCGACTTCAAGAACGAACGCTTTATCGTTAACGG 287732 Query 6398 ATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCT 6457 ||||| | | | || || ||||| ||| | ||||| ||||| || || | ||| || Sbjct 287733 CTCGCACGATGCCACAAAACTTCAGGATTTATTGGACGGTTTTATCCGGAAATATGTTCT 287792 Query 6458 GTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTGTCTACCAAGAGAAACACCAT 6517 || | | ||||| || ||||| |||||||| || || | ||||| |||||| Sbjct 287793 CTGCCCTGCTTGCGACAATCCGGAAACCGAGCTGATGGTCAGCTCGAAGAGGGGCACCAT 287852 Query 6518 CTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTGGATTTATCA--CACAAACTC 6575 || || || ||||| || || || | ||||| |||| | || |||||| | Sbjct 287853 TTCCCAAGGTTGCAAGGCTTGTGGCCATCATGGTCTCTTGGA--GAGCAATCACAAATTG 287910 Query 6576 AACACCTTCATACTGAAGAATCCTCCA 6602 ||||| | ||| || || ||||| ||| Sbjct 287911 AACACGTACATTCTAAAAAATCCGCCA 287937 Score = 179 bits (198), Expect = 2e-40 Identities = 243/339 (72%), Gaps = 0/339 (0%) Strand=Plus/Plus Query 6158 CACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAAT 6217 ||||||||||| | |||| || || || ||||| || || |||||||| ||||| || Sbjct 277946 CACGATGGGGAGCGTGAATGTTAACCGCAATGTCAGTGATGCCTTCTACCGTTACAAGAT 278005 Query 6218 GCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAA 6277 |||||| || || || || ||||| |||||||| || || ||||| || ||||| || Sbjct 278006 GCCGCGGATTCAAGCAAAAGTGGAGGGCAAGGGAAATGGCATCAAAACGGTAATTGTTAA 278065 Query 6278 CATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGG 6337 |||| || || || ||| || |||| || || ||||| || || || ||| || || Sbjct 278066 CATGGTGGACGTAGCAAAGACGATCGGCCGTCCAGCCACATATCCAACCCTATACTTTGG 278125 Query 6338 GTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGG 6397 |||||||| | | |||| || || || || || || ||||| ||||||||||| Sbjct 278126 CTGCGAACTGGATGTCCAGATACAATTCGACTTCAGGAATGAACGCTTTATCGTTAACGG 278185 Query 6398 ATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCT 6457 |||||| | | | | || ||||| || || ||||| ||||| || || | ||| || Sbjct 278186 TTCGCATGATGCCACAACACTTCAGGATTTGCTGGACGGTTTTATCCGGAAATATGTTCT 278245 Query 6458 GTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGT 6496 || | | ||||| || ||||| |||||||| || || Sbjct 278246 CTGCCCTGCTTGCGACAATCCGGAAACCGAGCTGATGGT 278284 Score = 96.9 bits (106), Expect = 2e-15 Identities = 188/276 (68%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 6329 ATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCAT 6388 ||| || || |||||||| || | |||| || || || || || || ||||| || Sbjct 278290 ATACTTTGGCTGCGAACTGGGTGTCCAGATACAATTCGACTTCAGGAATGAACGCTTTAT 278349 Query 6389 CGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAA 6448 ||||||||| ||||| | | | | || ||||| || || ||||| ||||| || || Sbjct 278350 CGTTAACGGTTCGCACGATGCCACAACACTTCAGGATTTGCTGGACGGTTTTATCCGGAA 278409 Query 6449 GTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTGTCTACCAAGAG 6508 | ||| || || | | ||||| || ||||| |||||||| || || | ||||| Sbjct 278410 ATATGTTCTCTGCCCTGCTTGCGACAATCCGGAAACCGAGCTGATGGTCAGCTCGAAGAG 278469 Query 6509 AAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTGGATTTATCA-- 6566 |||||| || || || ||||| || || || | ||||| |||| | || Sbjct 278470 GGGCACCATTTCCCAAGGTTGCAAGGCTTGTGGCCATCATGGTCTCTTGGA--GAGCAAT 278527 Query 6567 CACAAACTCAACACCTTCATACTGAAGAATCCTCCA 6602 |||||| | ||||| | ||| || || ||||| ||| Sbjct 278528 CACAAATTGAACACGTACATTCTAAAAAATCCGCCA 278563 >seq48 Length=105913 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||| |||||||||||||||||||||||||| || |||||||| Sbjct 60592 AAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 60533 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 60532 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 60498 >seq386 Length=18369 Score = 125 bits (138), Expect = 5e-24 Identities = 74/77 (96%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4737 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGT 4678 Query 20007 GGTAATATTTAGCCTTA 20023 ||| |||||||||||| Sbjct 4677 GGTCGTATTTAGCCTTA 4661 >seq914 Length=660061 Score = 120 bits (132), Expect = 2e-22 Identities = 168/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 38083 AATCATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGT 38142 || |||| |||||||| | || | || | |||||| || |||||||||||||||| Sbjct 534237 AAACATTTCCACCTCTAAGGCGAAGTACAAGATGAAGTGTAGATTCCTTTTGAATATTGT 534178 Query 38143 AATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGAT 38202 | || ||||| |||| |||| || | || || || || || || || | ||| |||| Sbjct 534177 AGTCTGACAAGGTACGTCCGTCTTCAAGCTGCTTGCCCGCGAAAATCAGTCTTTGCTGAT 534118 Query 38203 CGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC 38262 | | |||| |||||||| ||| ||||||| || ||||| | | || ||| Sbjct 534117 CAGGAGGGATCCCTTCTTTATCCTGAATTTTTGCTTTGACATTTTCAATGGTGTCTGATG 534058 Query 38263 TTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||| ||||| ||||| || ||||| || || | ||||||||||| || |||||| Sbjct 534057 CTTCGACTTCCAATGTGATTGTTTTGCCAGTAAGAGTTTTCACGAAGATTTGCATG 534002 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | ||| | | |||||||| | ||| ||||| ||||| |||||||| || Sbjct 533545 CCACCACGCAACCTAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTGTAATCGGAA 533486 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | |||||||||||||| || | || || ||||| | ||| Sbjct 533485 AGCGTGCGGCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAATCGCTGCTGATCTGGAGGG 533426 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| |||||| |||||| ||| ||||| | || |||||| ||| ||| Sbjct 533425 ATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATCGTATCTGACGCTTCGACT 533366 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || |||||||| ||||| || |||| || || ||||| ||||||||| Sbjct 533365 TCCAATGTAATGGTTTTGCCAGTCAGAGTCTTGACGAAGATCTGCATG 533318 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | ||| | | |||||||| | ||| ||||| ||||| |||||||| || Sbjct 533773 CCACCACGCAATCTAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTGTAATCGGAA 533714 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | |||||||||||||| || | || || ||||| | ||| Sbjct 533713 AGCGTGCGGCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAATCGCTGCTGATCTGGAGGG 533654 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| |||||| |||||| ||| ||||| | || |||||| ||| ||| Sbjct 533653 ATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATCGTATCTGACGCTTCGACT 533594 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || |||||||| ||||| || || | || |||||||| || |||||| Sbjct 533593 TCCAATGTAATGGTTTTGCCAGTAAGAGTCTTCACGAAAATTTGCATG 533546 >seq6 Length=1016685 Score = 95.1 bits (104), Expect = 8e-15 Identities = 137/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 38128 CCTTT-TGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 ||||| || ||||||||||| || | ||| | || || | |||||| |||||||| Sbjct 447903 CCTTTCTGGATATTGTAATCCGAAAGTGTGCGTCCATCTTCCAGTTGTTTGCCGGCAAAA 447844 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || || || || ||||| | ||||| ||| || |||||| || || |||||||| Sbjct 447843 ATAAGCCGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTCACATTT 447784 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | | ||||| | || || || | ||||| || |||||||| | ||||||||| Sbjct 447783 TCAATGGTATCGGAAGCCTCTACCTCGAGGGTAATGGTCTTACCCGTGAGGGTTTTCACA 447724 Query 38307 AATATCTGCATG 38318 || ||||||||| Sbjct 447723 AAGATCTGCATG 447712 >seq121 Length=2071819 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/233 (69%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||||| || ||||| |||| ||||||||| ||||| || || || || | Sbjct 378932 CATT-CCACCTCGCAGACGCAGAACCAGATGAAGAGTAGATTCCTTCTGGATGTTATAGT 378874 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | | | || || | |||||| || || || || || ||||| ||||| | Sbjct 378873 CGGAGAGAGTTCTGCCATCTTCGAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCAG 378814 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | |||||| ||||| ||| || ||| ||||||| | || || | || Sbjct 378813 GAGGAATGCCTTCCTTGTCTTGAATCTTGGCCTTGACATTCTCTATGGTGTCAGAAGCTT 378754 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | ||||| | ||||| || || || || | ||||||||||| || |||||| Sbjct 378753 CGACTTCAAGGGTAATGGTCTTCCCAGTAAGAGTTTTCACGAAGATTTGCATG 378701 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||||| | ||||| |||| ||| || || ||||| || || || || | Sbjct 379160 CATT-CCACCTCGAAGACGCAGAACCAGATGGAGCGTAGATTCCTTCTGGATGTTATAGT 379102 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | | || || | ||| || || ||||| || || || || ||||| | Sbjct 379101 CGGAAAGGGTTCTGCCATCTTCGAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCTG 379042 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | |||||||||||| ||||| ||||||||||| | || || | || Sbjct 379041 GCGGAATTCCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCTATGGTGTCGGAAGCTT 378982 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| | ||||| |||||||| || | ||||||||||| |||||||| Sbjct 378981 CGACTTCAAGAGTAATGGTTTTACCTGTGAGCGTTTTCACGAAGATCTGCAT 378930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334928507748149