Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq921 107 2e-18 seq542 98.7 1e-15 >seq921 Length=431717 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 32458 TATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATG 32517 || ||| |||| |||||| ||| || | |||||| ||||| |||||||| || || | Sbjct 294440 TACAAACCTTTTCAAATCCTAATGCAACGAACAATCTGTCTGCAACAAATTCAATGTAAG 294381 Query 32518 TTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATT 32577 | ||| | | ||||||||||||||| |||| |||||| | ||| | || | |||| Sbjct 294380 TACACATGAGTGTACAATTCATTCCTATCAGTTCAACTGGCAACGCCTCTGTTAAGAATT 294321 Query 32578 CTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGG-- 32635 ||| ||| || || || || |||| || ||| |||| ||| || ||| Sbjct 294320 CTTTTTCGATTTCCACAGCATCCATTATTATTGATTTTAC---GCGCTCAAACGTTGGCT 294264 Query 32636 ATACAATAA-ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCT 32685 | |||| |||||||||||| |||||||| |||||||| |||| |||| Sbjct 294263 TTTGTATAATATGTTTAAACATTAAACATGCAAAATCGCAATGTAATCCCT 294213 >seq542 Length=247308 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 62457 CAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTAT 62516 |||||| ||| ||||| ||||||| ||||| ||||| | |||||||||||| | ||| Sbjct 50126 CAGCTAATTCGCAACTAGCCTCTAGAGCACCATAATACAGGGTTTCGAAGATTTGAATAT 50185 Query 62517 TTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTA 62576 | || || | || || ||| ||||||||||| | | | || || || ||||||| Sbjct 50186 TGAGTTCCTTAGCATCTTTGCTCTCAAATGGATACCTCATTAAGATGAATGCATCTGCTA 50245 Query 62577 ATCCTTGAACACCAATACC 62595 ||||||| || |||||||| Sbjct 50246 ATCCTTGTACGCCAATACC 50264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633595732488400