Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq921 127 2e-24 seq365 111 2e-19 >seq921 Length=431717 Score = 127 bits (140), Expect = 2e-24 Identities = 123/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 || || || || || | ||||||||||||||||||||| | |||||| || ||||| ||| Sbjct 293681 ATATAAGTTTCAATGAGCAGAGAATACATTTCAGAATGAATATTCTCGATGGCAATCTGG 293622 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || || ||||| || | || || | ||| | |||||||||| |||||| || | ||| Sbjct 293621 AAACCATAGAAGCAGCGTGCCTCTGCGATTTTCACTTCTTGACTAAATCTTTCAATTAGA 293562 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGC 93519 || |||||||| ||||| ||||| || ||||| || || Sbjct 293561 TTCTCATTGACAATACCGTCGGAAGCCGCAAAGAACGC 293524 Score = 123 bits (136), Expect = 3e-23 Identities = 163/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 93114 CTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCT 93173 ||||||||||||| || | || || ||||| || | |||||| | |||||||| || | Sbjct 294081 CTTCGTCTCGTGAGATGAGTTCGTTACTGAAAGTAAGACCTGGCATAAGTCCTCGCTTTT 294022 Query 93174 TGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATG 93233 | | ||| ||||| | ||||||||| ||| ||||| || || || || || || |||| Sbjct 294021 TTAACCAGAATATCGCAGCAAAACTGCCACTGAAAAAGATGCCCTCAACTGCCGCGAATG 293962 Query 93234 CCACAATACGTTCGGCAAAATTTGCGGAA---TTACTGCTGATCCATTTTAAAGCCCAAT 93290 | |||| ||| |||| ||| ||| | | | | ||||||| ||||| ||||||| Sbjct 293961 CAACAACACGCTCGGGAAA---TGCAGCACTCTCATGATTGATCCAGTTTAATGCCCAAT 293905 Query 93291 CGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATA 93335 || || ||| ||| ||| || || || |||| || ||||||| Sbjct 293904 TAGCCTTCTTCCTAACACAGGGAAGCGTCTCGAGCGCATTAAATA 293860 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 93587 AGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATG 93646 ||| | |||||||| ||||||||||| || || | || ||||||||||| ||||| || Sbjct 293309 AGAGCTACTTCTTCTACAGTCCAAAAGGAAGCCACGGCCTTTTTGTACATGTCCCAAATA 293250 Query 93647 TCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCT 93706 || |||||||||| || || || ||||| ||||| || |||| || |||||||| Sbjct 293249 TCAGGATATTGAATAGGGAAAATTACAAAGCGATTTGGACCTTCTTGGAGCAACGGCTCC 293190 Query 93707 AGTTGTGGGTCAAAC 93721 |||| || || ||| Sbjct 293189 AGTTCAGGATCGAAC 293175 >seq365 Length=2591453 Score = 111 bits (122), Expect = 2e-19 Identities = 76/83 (92%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326 |||||||||||| |||||||||||||||| |||||||||||||||| || |||||||||| Sbjct 918095 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGATCTGGTTCCCATCTGGGAGCGTGG 918036 Query 126327 GTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||| | |||| Sbjct 918035 GTTCGAACCCCACACTTAGCAAA 918013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556828926679960