Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq568 91.5 3e-13 seq224 91.5 3e-13 seq160 91.5 3e-13 seq121 91.5 3e-13 seq100 91.5 3e-13 seq78 91.5 3e-13 seq137 89.7 1e-12 >seq568 Length=858451 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 355048 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 355107 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 355108 CCCCACGTTGGGC 355120 >seq224 Length=1920887 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 114517 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 114458 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 114457 CCCCACGTTGGGC 114445 >seq160 Length=3294394 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||| || ||||||| ||| ||||||||||||||||||||||||||| |||||||||| Sbjct 1581535 TGTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGAT 1581594 Query 142112 CCCCGCCAGAGACGC 142126 |||||| || || || Sbjct 1581595 CCCCGCAAGGGATGC 1581609 >seq121 Length=2071819 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1946511 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1946570 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 1946571 CCCCACGTTGGGC 1946583 >seq100 Length=669894 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 609868 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 609927 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 609928 CCCCACGTTGGGC 609940 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCG-TGGGTTCGAG 142562 |||||| |||||||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct 537215 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTTGGGTTCGAG 537274 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 537275 CCCCACGTTGGGC 537287 >seq78 Length=461637 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 252182 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 252123 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 252122 CCCCACGTTGGGC 252110 >seq137 Length=1531772 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109 || ||| |||||||||| ||| ||||||||||||||||||||||||||| | ||||||| Sbjct 434328 CAAGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCG 434269 Query 142110 ACCCCCGCCAGAGA 142123 | |||| |||| || Sbjct 434268 ATCCCCACCAGGGA 434255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027776498420939