Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq80 105 2e-19 >seq80 Length=2180204 Score = 105 bits (116), Expect = 2e-19 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||| ||| |||||||| |||| |||| || || || |||||||| ||| | | Sbjct 455600 ACCCGATGGCCCGAGTCTTCCCAAAGGTCACCAAGTGCACCTTCCACAAATATGGTGCGT 455541 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 | ||| | || | || | ||| || || ||| | || || ||| | |||||||||| Sbjct 455540 CCGGCACGGTGCAGAAGTTCGACGGTCTGTGCGTACTACCACTCAACATCGTCAACGAGA 455481 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCCATCATCAGCGGTATCGTTG 3511 |||||||| | |||||||||||||||||| | | || | ||||| |||||| || | Sbjct 455480 AGATCTACGTCTTCCTCTGGTTCTGGTTCATCCTCCTGTCGATCATGAGCGGTCTCAGTC 455421 Query 3512 TTCTGTACCGCATTGC 3527 | |||||||| || || Sbjct 455420 TGCTGTACCGTATCGC 455405 Score = 80.6 bits (88), Expect = 7e-12 Identities = 94/127 (74%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 2675 CCGTGAAGGGCTTAATAAAGCTTCCAACAGTCTCCATCGACAATGTATTCTTCCGGTTGC 2734 |||||||||| || | ||||| | || | ||||||||| | ||||| |||| Sbjct 456254 CCGTGAAGGGGTTGCTGAAGCTCGACTCGGTGTGCATCGACAACAACGTGTTCCGCTTGC 456195 Query 2735 ATTACCAGTTCACCGTGATCATCCTCATCGCGTTTTCATTGCTGGTGACTTCGCGGCAGT 2794 | ||| || |||||||||| ||| ||| || || ||||||||||| |||||||||| Sbjct 456194 ACTACAAGGCCACCGTGATCGGCCTGATCATCTTCTCGTTGCTGGTGACCTCGCGGCAGT 456135 Query 2795 ACTTCGG 2801 || |||| Sbjct 456134 ACATCGG 456128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479374966500