Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq440 87.8 1e-12 seq412 82.4 6e-11 >seq440 Length=1504972 Score = 87.8 bits (96), Expect = 1e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 118161 ATACACTCCGACAGTTTTCCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCC 118220 || || |||| | || ||||||||||| || | || |||||||||| || || || Sbjct 526704 ATGCAATCCGCTAATTCGCCGTCGCGACCAGCGCGGCCGCTCTCTTGATAGTAGCCCTCA 526763 Query 118221 AGTGATTTGGGCATA-CTGTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCAT 118279 | ||||| || | | ||| | |||||||| || ||||||| || ||||| |||||||| Sbjct 526764 ATGGATTTCGGTAGAGCTGCG-TGTATCACAAAACGCACGTTCGGCTTATCAATGCCCAT 526822 Query 118280 CCCGAACGCTATCGTCGAACATATCAC 118306 ||| || |||| || | |||||| || Sbjct 526823 CCCAAAAGCTACAGTTGCACATATAAC 526849 >seq412 Length=891701 Score = 82.4 bits (90), Expect = 6e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 108464 AGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACA 108523 |||||||| ||||||||||| |||||||||| | | |||||| || || || |||| Sbjct 75123 AGTGGGTGAGGGATCACAGGGTCCACCACAAGTTCACGGACACGGACGCGGATCCGCACA 75182 Query 108524 ACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCT 108563 |||| | ||||| |||| |||||||| |||| ||||| Sbjct 75183 ACGCGCAGAGGGGCTTCTTCTTCTCGCATATGGGCTGGCT 75222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381751494572376