Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq914 141 7e-28 seq121 122 7e-22 seq6 89.7 4e-12 >seq914 Length=660061 Score = 141 bits (156), Expect = 7e-28 Identities = 166/222 (75%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || || |||||||||||||| ||| ||| || ||||||||| || | | || Sbjct 534223 CTAAGGCGAAGTACAAGATGAAGTGTAGATTCCTTTTGAATATTGTAGTCTGACAAGGTA 534164 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | |||||||| || || || || ||||| |||||||||||||||||||| || ||| Sbjct 534163 CGTCCGTCTTCAAGCTGCTTGCCCGCGAAAATCAGTCTTTGCTGATCAGGAGGGATCCCT 534104 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAG 563432 |||||||| ||||||||| ||| || ||||| || || | || || ||| | Sbjct 534103 TCTTTATCCTGAATTTTTGCTTTGACATTTTCAATGGTGTCTGATGCTTCGAC-TTCCAA 534045 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | ||||| |||||||||||||| ||||| |||||||| Sbjct 534044 TGTGATTGTTTTGCCAGTAAGAGTTTTCACGAAGATTTGCAT 534003 Score = 105 bits (116), Expect = 5e-17 Identities = 147/202 (73%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 563274 AAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTT 563333 |||| | || |||| | ||| ||||| |||| || || | |||||||||||||| Sbjct 533974 AAGGTTGATTCCTTTTG-AATGTTGTAGTCAGAGAGCGTGCGGCCGTCTTCAAGTTGTTT 533916 Query 563334 TCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTG 563393 ||| || || || | ||||| || || || || |||||||| |||||||| |||||| Sbjct 533915 TCCAGCGAAGATCAACCTTTGTTGGTCCGGTGGGATTCCTTCCTTATCTTGGATTTTTGC 533856 Query 563394 TTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAA 563452 ||| || |||||||| || | || || || | ||| | ||||| ||||||| Sbjct 533855 TTTGACATTTTCAATTGTGTCTGATGCTTCGAC-CTCCAAAGTGATTGTTTTGCCAGTAA 533797 Query 563453 GAGTTTTAACGAAAATTTGCAT 563474 |||| || |||||||||||||| Sbjct 533796 GAGTCTTCACGAAAATTTGCAT 533775 Score = 91.5 bits (100), Expect = 1e-12 Identities = 132/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| |||||||| | || || | || || || |||||||||||||| || | || Sbjct 533729 AATGTTGTAATCGGAAAGCGTGCGGCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAATCG 533670 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||||| ||||| |||||||| || || || |||||| || || || || || Sbjct 533669 CTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGGATTTTTGCCTTGACATTTTCGATCGT 533610 Query 563412 ATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 ||| | | || ||| | |||| ||||| ||||||||||| || |||||||||| Sbjct 533609 ATCTGACGCTTCGAC-TTCCAATGTAATGGTTTTGCCAGTAAGAGTCTTCACGAAAATTT 533551 Query 563471 GCAT 563474 |||| Sbjct 533550 GCAT 533547 Score = 86.0 bits (94), Expect = 5e-11 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 || ||||| || || |||||| ||| ||||| || | || || | || || Sbjct 533299 ACCAGATGCAGAGTGGATTCTTTTTGAATGTTGTAGTCGGAAAGTGTGCGGCCGTCCTCG 533240 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 || |||||||||||||| || | || |||||||| ||||| |||||||| || || || Sbjct 533239 AGCTGTTTTCCGGCAAAGATCAATCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGG 533180 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTT 563444 ||||| ||| || |||||||| || | | | || || ||||| | || || Sbjct 533179 ATTTTAGCTTTGACGTTTTCAATTGTGTCCG-AAGCTTCCACCTCCAGAGTGATGGTCTT 533121 Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| ||||| || ||||| || |||||| Sbjct 533120 GCCAGTGAGAGTCTTGACGAAGATCTGCATA 533090 >seq121 Length=2071819 Score = 122 bits (134), Expect = 7e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || |||||||| ||| ||| || || || || || | |||||||| Sbjct 378919 AGACGCAGAACCAGATGAAGAGTAGATTCCTTCTGGATGTTATAGTCGGAGAGAGTTCTG 378860 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| |||||||| || || || || || | |||||||||||||||||| ||||| Sbjct 378859 CCATCTTCGAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATGCCTTCC 378800 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 || |||||||| || || || ||| || || |||| | || ||| || || Sbjct 378799 TTGTCTTGAATCTTGGCCTTGACATTCTCTATGGTGTCAGAAGCTTCGAC-TTCAAGGGT 378741 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || |||||||||||||| ||||| |||||||| Sbjct 378740 AATGGTCTTCCCAGTAAGAGTTTTCACGAAGATTTGCAT 378702 Score = 100 bits (110), Expect = 2e-15 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || ||||| || ||| ||| || || || || || | || ||||| Sbjct 379147 AGACGCAGAACCAGATGGAGCGTAGATTCCTTCTGGATGTTATAGTCGGAAAGGGTTCTG 379088 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| ||||| || || |||||||| || | |||||||| || |||||||||||| Sbjct 379087 CCATCTTCGAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCTGGCGGAATTCCTTCT 379028 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 || || || ||||| || || ||| || || || | | || ||| ||||| Sbjct 379027 TTGTCCTGGATTTTGGCCTTCACATTCTCTATGGTGTCGGAAGCTTCGAC-TTCAAGAGT 378969 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || |||||||| || || ||||| ||||| || ||||| Sbjct 378968 AATGGTTTTACCTGTGAGCGTTTTCACGAAGATCTGCAT 378930 >seq6 Length=1016685 Score = 89.7 bits (98), Expect = 4e-12 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 ||||||||||| | || || | | |||||| |||||||| |||||||||||||| | Sbjct 447894 ATATTGTAATCCGAAAGTGTGCGTCCATCTTCCAGTTGTTTGCCGGCAAAAATAAGCCGC 447835 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 |||||||| || || || || || || || || || || ||| || ||||| ||| Sbjct 447834 TGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTCACATTTTCAATGGTA 447775 Query 563413 TCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | | ||| ||||| |||| || ||||| || || ||||| || || || || Sbjct 447774 TCGGAAGCCTCTAC-CTCGAGGGTAATGGTCTTACCCGTGAGGGTTTTCACAAAGATCTG 447716 Query 563472 CAT 563474 ||| Sbjct 447715 CAT 447713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029053841828710