Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq121 145 5e-29 seq914 114 8e-20 seq615 107 1e-17 seq6 86.0 4e-11 >seq121 Length=2071819 Score = 145 bits (160), Expect = 5e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || || |||||||| ||| ||| || | ||||| || | |||||| Sbjct 378922 CGCAGACGCAGAACCAGATGAAGAGTAGATTCCTTCTGGATGTTATAGTCGGAGAGAGTT 378863 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||| ||||| || ||||| || || |||||||| |||||||||||||| ||| Sbjct 378862 CTGCCATCTTCGAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATGCCT 378803 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 ||||||||||||||||| |||||| || || || |||| | ||||||| Sbjct 378802 TCCTTGTCTTGAATCTTGGCCTTGACATTCTCTATGGTGTCAGAAGCTTCGACTTCAAGG 378743 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || ||||| || ||||| ||||| Sbjct 378742 GTAATGGTCTTCCCAGTAAGAGTTTTCACGAAGATTTG 378705 Score = 118 bits (130), Expect = 7e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || || ||||| || ||| ||| || | ||||| || | || ||| Sbjct 379150 CGAAGACGCAGAACCAGATGGAGCGTAGATTCCTTCTGGATGTTATAGTCGGAAAGGGTT 379091 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||| |||||||| ||||||||||| ||||| || ||||| || ||||||||| Sbjct 379090 CTGCCATCTTCGAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCTGGCGGAATTCCT 379031 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || ||||| || || || || ||| || || || || | | |||||| Sbjct 379030 TCTTTGTCCTGGATTTTGGCCTTCACATTCTCTATGGTGTCGGAAGCTTCGACTTCAAGA 378971 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| |||||||| ||||| || || ||||| || || Sbjct 378970 GTAATGGTTTTACCTGTGAGCGTTTTCACGAAGATCTG 378933 >seq914 Length=660061 Score = 114 bits (126), Expect = 8e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 480554 AAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCT 480613 ||| || |||||||||||||||||| ||| || || ||| || || | | || | Sbjct 534221 AAGGCGAAGTACAAGATGAAGTGTAGATTCCTTTTGAATATTGTAGTCTGACAAGGTACG 534162 Query 480614 GTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTC 480673 |||||||| ||||| || || ||||| || | ||| ||||||||||| || ||||| Sbjct 534161 TCCGTCTTCAAGCTGCTTGCCCGCGAAAATCAGTCTTTGCTGATCAGGAGGGATCCCTTC 534102 Query 480674 CTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGG 480732 || || ||||| ||| ||||||| |||||| || || | || | | || ||| | Sbjct 534101 TTTATCCTGAATTTTTGCTTTGACATTTTCAATGGTGTCTGATGCTTCGACTTCCAA-TG 534043 Query 480733 TAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || ||||| || || ||||| || ||||| ||||| Sbjct 534042 TGATTGTTTTGCCAGTAAGAGTTTTCACGAAGATTTG 534006 Score = 102 bits (112), Expect = 5e-16 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||||||||| |||||||| || || | | |||||| || || || ||||||||||| Sbjct 533929 TCTTCAAGTTGTTTTCCAGCGAAGATCAACCTTTGTTGGTCCGGTGGGATTCCTTCCTTA 533870 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 ||||| || ||| ||||||| |||||| || || | || | | | ||| || || Sbjct 533869 TCTTGGATTTTTGCTTTGACATTTTCAATTGTGTCTGATGCTTCGACCTCCAA-AGTGAT 533811 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || |||||||| ||||||||||| Sbjct 533810 TGTTTTGCCAGTAAGAGTCTTCACGAAAATTTG 533778 Score = 93.3 bits (102), Expect = 3e-13 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || || || ||||| ||||| || | || || ||||| ||||| |||||||||||| Sbjct 533701 TCCTCGAGCTGTTTTCCGGCAAAGATCAATCGCTGCTGATCTGGAGGGATTCCTTCCTTG 533642 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 || || || ||| |||||| ||| || ||||| | | | | || ||| ||||| Sbjct 533641 TCCTGGATTTTTGCCTTGACATTTTCGATCGTATCTGACGCTTCGACTTCCAA-TGTAAT 533583 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || |||||||| ||||||||||| Sbjct 533582 GGTTTTGCCAGTAAGAGTCTTCACGAAAATTTG 533550 >seq615 Length=411552 Score = 107 bits (118), Expect = 1e-17 Identities = 267/399 (67%), Gaps = 10/399 (3%) Strand=Plus/Plus Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577 ||||| || | |||| |||||| || || || || || ||||| ||| ||| Sbjct 228408 GATGCGAAGCGCCTGATCGGTCGTCGGTTCGAAGACACTACCGTCCAGAGTGACATGAAG 228467 Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATAT--AGAAGCAATACACG 474635 || ||||| || | |||||| |||| || || || || | || || | |||| | Sbjct 228468 CACTGGCCATTCACGGTGATCAATGACGGAGGCAAGCCGAAGATCAAGGTGTCTTACAAG 228527 Query 474636 CAGGTGAAACTAA-ACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATG 474694 || || | || || | ||| || ||| | | || || ||||| | | || ||| Sbjct 228528 --GGCGAGATGAAGACTTTCTTC-CCTGAAGAGGTGTCCTCCATGGTACTGACGAAGATG 228584 Query 474695 AAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCA 474754 || |||| ||| | ||||| || || || || | || || || ||||| ||| Sbjct 228585 AAGGAAACAGCGGAGGCGTATCTAGGGAAAACTGTGACAAACGCTGTGATCACTGTGCCA 228644 Query 474755 GCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTT 474814 || || || ||||| || ||||| |||||||| || ||||| || |||||| ||| | Sbjct 228645 GCTTACTTCAATGACTCCCAACGGCAAGCAACGAAGGATGCCGGCGCAATTGCCGGTTTG 228704 Query 474815 AATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAG 474874 || || | | || || || || |||||||||||||| | || |||||||| || ||| Sbjct 228705 AACGTCCTCAGGATAATAAACGAGCCAACAGCAGCCGCGATAGCGTATGGTCTCGACAAG 228764 Query 474875 AATTCTGAC--AAAGAAGTAAATGTTTTAATCTTTGATT 474911 || ||| | ||||| || || || ||||| |||| Sbjct 228765 AAGGCTGCCGGCGAGAAG--AACGTCTTGATCTTCGATT 228801 >seq6 Length=1016685 Score = 86.0 bits (94), Expect = 4e-11 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| ||||| || || ||||||||||| || || ||||| || || || || ||||| Sbjct 447868 ATCTTCCAGTTGTTTGCCGGCAAAAATAAGCCGCTGCTGATCTGGGGGGATGCCCTCCTT 447809 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 ||| || ||||| ||| ||| |||||| ||||| | | | | || ||||||| Sbjct 447808 GTCCTGGATCTTGGCTTTCACATTTTCAATGGTATCGGAAGCCTCTA-CCTCGAGGGTAA 447750 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || ||||| ||||| || || || || || || Sbjct 447749 TGGTCTTACCCGTGAGGGTTTTCACAAAGATCTG 447716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267982784472692