Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq914 116 7e-21 seq121 114 2e-20 >seq914 Length=660061 Score = 116 bits (128), Expect = 7e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||||||||| || | ||| | ||| | |||| || || |||||| || ||||| Sbjct 534229 CCACCTCTAAGGCGAAGTACAAGATGAAGTGTAGATTCCTTTTGAATATTGTAGTCTGAC 534170 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 || | ||| |||| || | || || || || ||||| | ||| || || ||||| || Sbjct 534169 AAGGTACGTCCGTCTTCAAGCTGCTTGCCCGCGAAAATCAGTCTTTGCTGATCAGGAGGG 534110 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || ||||||||||| || ||||| ||| ||||| || || ||||| | ||| ||| Sbjct 534109 ATCCCTTCTTTATCCTGAATTTTTGCTTTGACATTTTCAATGGTGTCTGATGCTTCGACT 534050 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || | || || ||||| ||||| | ||||| | ||| || ||||| Sbjct 534049 TCCAATGTGATTGTTTTGCCAGTAAGAGTTTTCACGAAGATTTGCAT 534003 Score = 107 bits (118), Expect = 3e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920 || ||||| ||||| | || || ||| || ||||| || | | || |||| || Sbjct 533527 ACCAAATGCAAAGTCGATTCCTTCTGAATGTTGTAATCGGAAAGCGTGCGGCCGTCCTCG 533468 Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980 | ||||| || ||||| || |||| ||| || || || || |||||||| || || || Sbjct 533467 AGCTGTTTTCCGGCAAAGATCAATCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGG 533408 Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040 ||||| || ||||| || |||||||||| ||| ||||| | ||||||||||| Sbjct 533407 ATTTTTGCCTTGACATTTTCGATCGTATCTGACGCTTCGACTTCCAATGTAATGGTTTTG 533348 Query 172041 CCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | || || | ||| |||||||| Sbjct 533347 CCAGTCAGAGTCTTGACGAAGATCTGCAT 533319 Score = 102 bits (112), Expect = 1e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920 || ||||| ||||| | || || ||| || ||||| || | | || |||| || Sbjct 533755 ACCAAATGCAAAGTCGATTCCTTCTGAATGTTGTAATCGGAAAGCGTGCGGCCGTCCTCG 533696 Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980 | ||||| || ||||| || |||| ||| || || || || |||||||| || || || Sbjct 533695 AGCTGTTTTCCGGCAAAGATCAATCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGG 533636 Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040 ||||| || ||||| || |||||||||| ||| ||||| | ||||||||||| Sbjct 533635 ATTTTTGCCTTGACATTTTCGATCGTATCTGACGCTTCGACTTCCAATGTAATGGTTTTG 533576 Query 172041 CCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | || || | ||| || ||||| Sbjct 533575 CCAGTAAGAGTCTTCACGAAAATTTGCAT 533547 >seq121 Length=2071819 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||| ||| || | || ||||| | |||| || || ||| ||||| || Sbjct 380071 ATTCCACCTCGAAGACGCAGAACCAAATGGAGCGTAGATTCCTTCTGAATGTTATAGTCG 380012 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || |||| |||||||||||||| || || | ||| ||||| || Sbjct 380011 GAAAGGGTTCTGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGA 379952 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| || || ||||| || ||||| ||| || || || | ||| Sbjct 379951 GGAATACCTTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTGTCCGATGCTTCG 379892 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| || || |||||||| || || | ||| || | ||| ||||||||| Sbjct 379891 ACTTCCAGGGTGATGGTTTTGCCCGTGAGTGTCTTCACGAAAATCTGCATT 379841 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 || || | ||||||||| ||||| || | || | |||||| || || || || || Sbjct 381664 CCTCCACGAAGTCGTAAGACTAAGTGAAGTGTGGACTCTTTCTGGATGTTGTAGTCGGAA 381605 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | || |||| ||||||||||| || || || | ||| ||||| || || Sbjct 381604 AGGGTTCTGCCATCTTCCAGCTGTTTACCAGCGAAGATCAAACGCTGCTGGTCGGGAGGA 381545 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || |||||||| || || ||||| || ||||| ||| || || |||| ||| ||| Sbjct 381544 ATACCTTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTGTCCGACGCTTCGACT 381485 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || || || |||||||| || || | ||| || | ||| ||||||||| Sbjct 381484 TCCAGGGTGATGGTTTTGCCCGTGAGTGTCTTCACGAAAATCTGCATT 381437 Score = 111 bits (122), Expect = 3e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||| ||| || | || | ||| | |||| || || || ||||| || Sbjct 379159 ATTCCACCTCGAAGACGCAGAACCAGATGGAGCGTAGATTCCTTCTGGATGTTATAGTCG 379100 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || || | ||| || ||||||||||| | | ||| || || || Sbjct 379099 GAAAGGGTTCTGCCATCTTCGAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGATCTGGC 379040 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| || || ||||| || ||||| ||| || || || | ||| Sbjct 379039 GGAATTCCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCTATGGTGTCGGAAGCTTCG 378980 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| ||||||||||||||||| || | ||||| | ||| ||||||||| Sbjct 378979 ACTTCAAGAGTAATGGTTTTACCTGTGAGCGTTTTCACGAAGATCTGCATT 378929 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||| || || | || | ||| | ||||| || || || ||||| || Sbjct 378931 ATTCCACCTCGCAGACGCAGAACCAGATGAAGAGTAGATTCCTTCTGGATGTTATAGTCG 378872 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || || | |||||||||||| || || | | || || ||||| Sbjct 378871 GAGAGAGTTCTGCCATCTTCGAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCAGGA 378812 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || ||||| ||| || || || | ||| Sbjct 378811 GGAATGCCTTCCTTGTCTTGAATCTTGGCCTTGACATTCTCTATGGTGTCAGAAGCTTCG 378752 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || |||||||| || ||||| | ||||| | ||| || ||||| Sbjct 378751 ACTTCAAGGGTAATGGTCTTCCCAGTAAGAGTTTTCACGAAGATTTGCAT 378702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905084192278200