Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq797 116 1e-20 seq425 116 1e-20 seq71 104 7e-17 >seq797 Length=99213 Score = 116 bits (128), Expect = 1e-20 Identities = 149/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| ||||||||| ||| || || |||||||||||||| ||||||||| | || || | Sbjct 54778 CGATGGTCATACGAGAGGGGATGGCGTGGGGATTGATGATAATGTCGGGTGTGAGACCCT 54837 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCTCAATAATG-TTTCCAATAGTTCCCTTTTGTCCG 251961 || ||||| |||||||| | || | | || || |||| || ||||| || ||| Sbjct 54838 CACAGGTGAACGGCATATCTTCTTGC-CTGTATTGAATTCCGCATGTACCCTTCTGCCCG 54896 Query 251962 TGACGAGAACTGAACTTATCACCAATAACAGGACGGCGAACACTACGAAGGCGAACCTTA 252021 ||||| || |||||| || || || ||| ||| |||||||| | ||||| ||| Sbjct 54897 TGACGCGACGCGAACTTGTCGCCGATCTGCGGAATGCGCACACTACGCACGCGAATCTTG 54956 Query 252022 CAGAAGTTGTAACCATCACCGTT 252044 ||||| ||||| || || | ||| Sbjct 54957 CAGAACTTGTATCCCTCGCTGTT 54979 >seq425 Length=532288 Score = 116 bits (128), Expect = 1e-20 Identities = 149/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| ||||| ||| ||| || || |||||||||||||| ||||||||| | || || | Sbjct 437328 CGATGGTCATGCGAGAGGGGATGGCGTGGGGATTGATGATAATGTCGGGTGTGAGACCCT 437387 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCTCAATAATG-TTTCCAATAGTTCCCTTTTGTCCG 251961 || ||||| |||||||||| || | | || || |||| || ||||| || ||| Sbjct 437388 CACAGGTGAACGGCATATCCTCTTGC-CTGTATTGAATTCCGCACGTACCCTTCTGCCCG 437446 Query 251962 TGACGAGAACTGAACTTATCACCAATAACAGGACGGCGAACACTACGAAGGCGAACCTTA 252021 ||||| || |||||| || || || ||| ||| |||||||| | ||||| ||| Sbjct 437447 TGACGCGACGCGAACTTGTCGCCGATCTGCGGAATGCGCACACTACGCACGCGAATCTTG 437506 Query 252022 CAGAAGTTGTAACCATCACCGTT 252044 ||||| ||||| || || | ||| Sbjct 437507 CAGAACTTGTATCCCTCGCTGTT 437529 >seq71 Length=3320770 Score = 104 bits (114), Expect = 7e-17 Identities = 190/273 (70%), Gaps = 8/273 (3%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| || || | ||||||||| || ||||| || | ||| || || || ||| Sbjct 2567678 TCCATAGCTTTTATCAGACGACGCTGGATGTAACCGGTCTCGGCTGTCTTCACGGCGGTA 2567619 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 || || ||||| | ||||| ||||| || |||||| | | ||| ||| ||| || || Sbjct 2567618 TCGATGAGACCTTCGCGACCTCCCATGGCGTGGAAGTAAAACTCGGACGG-CGTGAGACC 2567560 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGT 302750 | | | | || |||| ||||| ||||| | || || || ||||||| ||| | Sbjct 2567559 GGCGAGATACGAATTCTCGACGAAGCCACGGGATTCAGGACCGTAATCGTCT---TTGAT 2567503 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||||||||| || || || | ||||| | || || || || || ||||||||||| Sbjct 2567502 AAAGTGTGGCAACGTTCTCTTGCGAAAGCCGAAAGGTATTCGTTTACCTTCAACGTTCTG 2567443 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 ||| || | ||| | || | ||| || || || Sbjct 2567442 CTGACCGACGCAAGCGATTACCTGAGAGATGTT 2567410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471731250761123