Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq921 214 1e-50 seq914 84.2 2e-11 >seq921 Length=431717 Score = 214 bits (236), Expect = 1e-50 Identities = 256/348 (74%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 34309 ACGATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAA 34368 || || ||||| || ||||| ||||| || | || || | ||| | || ||||| ||| Sbjct 287831 ACCATCAGCTCGGTTTCCGGATTGTCGCAAGCAGGGCAGAGAACATATTTCCGGATAAAA 287772 Query 34369 CCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG 34428 || || | | ||||| | || || ||||| |||||||| ||||| || |||||| Sbjct 287771 CCGTCCAATAAATCCTGAAGTTTTGTGGCATCGTGCGAGCCGTTAACGATAAAGCGTTCG 287712 Query 34429 TTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAA 34488 || ||| | |||| ||||| || || ||||| ||||| |||||||| || || || || Sbjct 287711 TTCTTGAAGTCGAATTGCGTCTGTGCACCCAGTTCGCAGCCGAAGTATTTGGTTGGATAT 287652 Query 34489 ATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATG 34548 |||| ||||| || | |||||| || | || |||||| || || || || |||||| Sbjct 287651 GTGGCTGGACGGCCGATCGCCTTTGCTACGTCCACCATGTTAACAATTACCGTTTTGATG 287592 Query 34549 CCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCG 34608 || || ||||| || || || || || || |||||||| ||||| |||||||| || Sbjct 287591 CCATTTCCCTTGCCCTCCACTTTTGCTTGAATCCGCGGCATCTTGTAACGGTAGAAGGCA 287532 Query 34609 TCCGCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGCTGGTGTT 34656 || |||||||||||||| ||||| ||||||||||| ||| |||| Sbjct 287531 TCACTGACATTGCGGTTAACATTCACGCTCCCCATCGTGACTGATGTT 287484 Score = 163 bits (180), Expect = 2e-35 Identities = 245/348 (70%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 34309 ACGATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAA 34368 || || ||||| || ||||| ||||| || | || || | ||| | || ||||| ||| Sbjct 278284 ACCATCAGCTCGGTTTCCGGATTGTCGCAAGCAGGGCAGAGAACATATTTCCGGATAAAA 278225 Query 34369 CCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG 34428 || || |||| ||||| | | || || || || ||||| ||||| || ||||| Sbjct 278224 CCGTCCAGCAAATCCTGAAGTGTTGTGGCATCATGCGAACCGTTAACGATAAAGCGTTCA 278165 Query 34429 TTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAA 34488 || || | |||| || | || | |||| ||||| || ||||| || || || Sbjct 278164 TTCCTGAAGTCGAATTGTATCTGGACATCCAGTTCGCAGCCAAAGTATAGGGTTGGATAT 278105 Query 34489 ATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATG 34548 |||| ||||| || | || ||| || | || |||||| || || || || |||||| Sbjct 278104 GTGGCTGGACGGCCGATCGTCTTTGCTACGTCCACCATGTTAACAATTACCGTTTTGATG 278045 Query 34549 CCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCG 34608 || || ||||| || || || || || || |||||||| ||||| |||||||| || Sbjct 278044 CCATTTCCCTTGCCCTCCACTTTTGCTTGAATCCGCGGCATCTTGTAACGGTAGAAGGCA 277985 Query 34609 TCCGCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGCTGGTGTT 34656 || |||||||||||||| ||||| ||||||||||| ||| |||| Sbjct 277984 TCACTGACATTGCGGTTAACATTCACGCTCCCCATCGTGACTGATGTT 277937 >seq914 Length=660061 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331 |||||||| || || || ||| | || |||||||||||||| | ||| || ||| | | Sbjct 533547 ATGCAAATTTTCGTGAAGACTCTTACTGGCAAAACCATTACATTGGAAGTCGAAGCGTCA 533606 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| ||| | || || || || ||||| ||||| | || ||||| Sbjct 533607 -GATACGATCGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCAGATCA 533665 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || | || | ||| || |||||||| ||||| | | | || | | |||||||| Sbjct 533666 GCAGCGATTGATCTTTGCCGGAAAACAGCTCGAGGACGGCCGCACGCTTTCCGATTACAA 533725 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| || ||||| || ||||| |||| | ||| |||| || || Sbjct 533726 CATTCAGAAGGAATCGACTTTGCATTTGGTTCTTAGATTGCGTGGTGG 533773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412818560729447