Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq121 172 1e-37 seq914 167 5e-36 seq6 127 4e-24 seq70 107 4e-18 >seq121 Length=2071819 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||| || ||||||||| | || ||||||||||| ||||| || ||||| || || Sbjct 378928 CCACCTCGCAGACGCAGAACCAGATGAAGAGTAGATTCCTTCTGGATGTTATAGTCGGAG 378869 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| |||| || ||||| |||||||| ||||| ||||| || | ||| ||||| ||||| Sbjct 378868 AGAGTTCTGCCATCTTCGAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCAGGAGGA 378809 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| ||||||||||| || || ||||| || || || ||| || ||| ||| Sbjct 378808 ATGCCTTCCTTGTCTTGAATCTTGGCCTTGACATTCTCTATGGTGTCAGAAGCTTCGACT 378749 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 || | || || ||||| || || | || || || || || ||||| || Sbjct 378748 TCAAGGGTAATGGTCTTCCCAGTAAGAGTTTTCACGAAGATTTGCATGAT 378699 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||| | ||||||||| || || || |||||||| ||||| || ||||| || || Sbjct 380068 CCACCTCGAAGACGCAGAACCAAATGGAGCGTAGATTCCTTCTGAATGTTATAGTCGGAA 380009 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || |||| || ||||| || ||||| ||||||||||| | | || || || ||||| Sbjct 380008 AGGGTTCTGCCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGA 379949 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| || || || || || || || |||||||| || || || | ||| ||| Sbjct 379948 ATACCTTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTGTCCGATGCTTCGACT 379889 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||| || || || ||||| || | ||||| || || ||||||||| Sbjct 379888 TCCAGGGTGATGGTTTTGCCCGTGAGTGTCTTCACGAAAATCTGCATT 379841 Score = 132 bits (146), Expect = 9e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||| | ||||||||| | || || |||||||||||||| || || || || || Sbjct 379840 CCACCTCGAAGACGCAGAACCAGATGGAGCGTAGATTCTTTCTGAATGTTGTAGTCGGAA 379781 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || |||| || ||||| || ||||| ||||| ||||| | | || || || ||||| Sbjct 379780 AGGGTTCTGCCATCTTCCAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGAGGA 379721 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| || || || || || || || |||||||| || || || | ||| ||| Sbjct 379720 ATGCCTTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTGTCCGACGCTTCGACT 379661 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||| || || || ||||| || | ||||| || || ||||||||| Sbjct 379660 TCCAGGGTGATGGTTTTGCCCGTGAGTGTCTTCACGAAAATCTGCATT 379613 >seq914 Length=660061 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| || |||| ||| ||||| ||||| || || ||||| || || | | ||||| Sbjct 533530 AGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTGTAATCGGAAAGCGTGCGGCCGTCC 533471 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || |||||||| |||||||| | || || ||||||||||| ||||||||||| || Sbjct 533470 TCGAGCTGTTTTCCGGCAAAGATCAATCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCC 533411 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || ||||| || |||||||| |||||||| | ||| |||||||| || || || Sbjct 533410 TGGATTTTTGCCTTGACATTTTCGATCGTATCTGACGCTTCGACTTCCAATGTAATGGTT 533351 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| |||| ||||| || || |||||||| Sbjct 533350 TTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 533319 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| || |||| || ||||| || || || || || ||||| || | | |||||| Sbjct 533986 AGAACCAAATGCAAGGTTGATTCCTTTTGAATGTTGTAGTCAGAGAGCGTGCGGCCGTCT 533927 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || |||||||||||||| ||||| | |||||||| || || || ||||||||||||||| Sbjct 533926 TCAAGTTGTTTTCCAGCGAAGATCAACCTTTGTTGGTCCGGTGGGATTCCTTCCTTATCT 533867 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || |||||||| ||||||||||| || || | ||| || |||||||| || || Sbjct 533866 TGGATTTTTGCTTTGACATTTTCAATTGTGTCTGATGCTTCGACCTCCAAAGTGATTGTT 533807 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || | ||||| || || || ||||| Sbjct 533806 TTGCCAGTAAGAGTCTTCACGAAAATTTGCAT 533775 Score = 159 bits (176), Expect = 7e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| || |||| ||| || || ||||| || || ||||| || || | | ||| Sbjct 533077 CGAAGAACCAAATGCAAAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGGCCG 533018 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || ||||||||||| ||||| | || || |||||||| || ||||||||||| Sbjct 533017 TCCTCGAGCTGTTTTCCAGCGAAGATCAATCGCTGCTGATCTGGGGGGATTCCTTCCTTG 532958 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||| || ||||| || || ||||||||||| || || || ||||| | ||||| Sbjct 532957 TCTTGGATTTTTGCCTTCACGTTTTCAATCGTGTCCGAAGCCTCAACTTCAAGGGTTATG 532898 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 || || || ||||||||||| || || |||||||| || Sbjct 532897 GTTTTCCCCGTCAACGTCTTCACGAAAATCTGCATGAT 532860 Score = 158 bits (174), Expect = 2e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| || |||| ||| ||||| ||||| || || ||||| || || | | ||||| Sbjct 533758 AGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTGTAATCGGAAAGCGTGCGGCCGTCC 533699 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || |||||||| |||||||| | || || ||||||||||| ||||||||||| || Sbjct 533698 TCGAGCTGTTTTCCGGCAAAGATCAATCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCC 533639 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || ||||| || |||||||| |||||||| | ||| |||||||| || || || Sbjct 533638 TGGATTTTTGCCTTGACATTTTCGATCGTATCTGACGCTTCGACTTCCAATGTAATGGTT 533579 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || | ||||| || || || ||||| Sbjct 533578 TTGCCAGTAAGAGTCTTCACGAAAATTTGCAT 533547 Score = 150 bits (166), Expect = 4e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 |||||||| |||||||| || || || || || || || | | ||||| || || ||| Sbjct 533293 TGCAGAGTGGATTCTTTTTGAATGTTGTAGTCGGAAAGTGTGCGGCCGTCCTCGAGCTGT 533234 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||| |||||||| | || || ||||||||||| ||||||||||| || || || || Sbjct 533233 TTTCCGGCAAAGATCAATCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGGATTTTA 533174 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||| || |||||||| || || || ||| || |||| ||| || |||||||| || Sbjct 533173 GCTTTGACGTTTTCAATTGTGTCCGAAGCTTCCACCTCCAGAGTGATGGTCTTGCCAGTG 533114 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| Sbjct 533113 AGAGTCTTGACGAAGATCTGCAT 533091 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | || || || | || || |||||||| || || ||||| || || || Sbjct 534229 CCACCTCTAAGGCGAAGTACAAGATGAAGTGTAGATTCCTTTTGAATATTGTAGTCTGAC 534170 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | |||||||| || || || || || || || |||||||| ||||| ||||| Sbjct 534169 AAGGTACGTCCGTCTTCAAGCTGCTTGCCCGCGAAAATCAGTCTTTGCTGATCAGGAGGG 534110 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| ||||| ||||| |||||||| ||||||||||| || || | ||| ||| Sbjct 534109 ATCCCTTCTTTATCCTGAATTTTTGCTTTGACATTTTCAATGGTGTCTGATGCTTCGACT 534050 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || || ||||| || | || || || || || ||||| Sbjct 534049 TCCAATGTGATTGTTTTGCCAGTAAGAGTTTTCACGAAGATTTGCAT 534003 >seq6 Length=1016685 Score = 127 bits (140), Expect = 4e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||| ||||| ||||| || || | | || ||||| |||||||| || ||||| | Sbjct 447902 CTTTCTGGATATTGTAATCCGAAAGTGTGCGTCCATCTTCCAGTTGTTTGCCGGCAAAAA 447843 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | || | || |||||||| || || || ||||| || || ||||| ||||| ||||||| Sbjct 447842 TAAGCCGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTCACATTTT 447783 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 |||| ||||| || ||||| || | || || ||||| || || | || || |||| Sbjct 447782 CAATGGTATCGGAAGCCTCTACCTCGAGGGTAATGGTCTTACCCGTGAGGGTTTTCACAA 447723 Query 82801 ATATCTGCAT 82810 | |||||||| Sbjct 447722 AGATCTGCAT 447713 >seq70 Length=1534319 Score = 107 bits (118), Expect = 4e-18 Identities = 100/127 (79%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||| ||| ||||| || ||||||||||||||||| ||||| ||||| ||||| || Sbjct 242832 ACCACCTCGCAAGCGCAGCACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCCGA 242891 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || ||||| | |||| | ||| || || || ||||| | || ||||||||| || || Sbjct 242892 AAGGGTTCTATCACCTTCCAATTGCTTGCCCGCGAAGATCAATCGTTGTTGATCCGGTGG 242951 Query 82703 TATTCCT 82709 |||||| Sbjct 242952 AATTCCT 242958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981769597732281