Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq921 140 4e-28 seq542 91.5 2e-13 >seq921 Length=431717 Score = 140 bits (154), Expect = 4e-28 Identities = 163/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 39422 TTTTTAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATC 39481 |||| |||||||||| | | |||||| |||||||||||||| ||||| || ||| Sbjct 294432 TTTTCAAATCCTAATGCAACGAACAATCTGTCTGCAACAAATTCAATGTAAGTACACATG 294373 Query 39482 ATTTCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCG 39541 | | ||||||||||||||| |||| |||||| | ||||| |||| || ||||||||| Sbjct 294372 AGTGTACAATTCATTCCTATCAGTTCAACTGGCAACGCCTCTGTTAAGAATTCTTTTTCG 294313 Query 39542 ATGTCTACGGCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAA 39601 || || || || || ||||||| ||| |||| |||| | || || | | | Sbjct 294312 ATTTCCACAGCATCCATTATTATTGATTTTACGCGCTCAAACGTTGGCTTTTGTATAATA 294253 Query 39602 TGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCT 39641 |||||||||||||| || || || || ||||||| |||| Sbjct 294252 TGTTTAAACATTAAACATGCAAAATCGCAATGTAATCCCT 294213 Score = 100 bits (110), Expect = 4e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 40113 CTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCAC 40172 |||||||||| | |||||||| || ||| | |||||||||||||||| ||| |||||| Sbjct 293305 CTACTTCTTCTACAGTCCAAAAGGAAGCCACGGCCTTTTTGTACATGTCCCAAATATCAG 293246 Query 40173 GATATTGTATTGGAAAAATAACAAATCTATTTGGA 40207 ||||||| || || ||||| ||||| | ||||||| Sbjct 293245 GATATTGAATAGGGAAAATTACAAAGCGATTTGGA 293211 >seq542 Length=247308 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 68962 TCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATT 69021 ||||||| |||| || |||||| ||| ||||| ||||||| ||||| ||||| | Sbjct 50107 TCATAAGTACCTTTCTCAGCAGCTAATTCGCAACTAGCCTCTAGAGCACCATAATACAGG 50166 Query 69022 GTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAA 69081 |||||||| || | ||||||| || | || ||| || || |||||||| | Sbjct 50167 GTTTCGAAGATTTGAATATTGAGTTCCTTAGCATCTTTGCTCTCAAATGGATACCTCATT 50226 Query 69082 AGAATAAATGCATCTGCCAATCCCTGAACCCCAATACC 69119 | || ||||||||||| ||||| || || |||||||| Sbjct 50227 AAGATGAATGCATCTGCTAATCCTTGTACGCCAATACC 50264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686869483057560