Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq365 113 4e-20 >seq365 Length=2591453 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 34499 GTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAAC 34558 || || |||| |||||| ||| || |||||| | ||| | |||| ||| |||||| Sbjct 263929 GTTATTGACAAACTGAAGCATTCCCCGGAGGACAGACGTATCATAATGTCCGCCTGGAAC 263988 Query 34559 CCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC 34618 || | ||| |||| ||||| | || ||||||||| |||| ||| || ||||| Sbjct 263989 CCAATTGATATCCCAAAAATGGCATTGCCACCGTGCCACGCCCTAGTCCAGTTTTACGTA 264048 Query 34619 -GCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGT 34677 |||| |||||| ||||| || || || ||| || | ||| ||||| |||| || Sbjct 264049 AGCGA-TGGGGAATTGTCCGCGCAACTTTACCAAAGAAGCGCAGATATGGGTCTAGGAGT 264107 Query 34678 GCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGT 34728 |||||||||||| || ||| || | || || |||||||||||||| || Sbjct 264108 GCCGTTCAACATAGCGTCGTACTCTTTACTGACTTACATGATCGCTCACGT 264158 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || |||||||||||||| || || | || ||| || |||||||||||||| |||| Sbjct 264158 ACGTGAGCGATCATGTAAGTCAGTAAAGAGTACGACGCTATGTTGAACGGCACTCCTAGA 264099 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGC-GACGTAGAA 6735 ||||| ||| | || ||| || || || ||||| |||||| |||| ||||| || Sbjct 264098 CCCATATCTGCGCTTCTTTGGTAAAGTTGCGCGGACAATTCCCCA-TCGCTTACGTAAAA 264040 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795 ||| |||| ||||||||| || | ||||| |||| ||| | |||||||| || Sbjct 264039 CTGGACTAGGGCGTGGCACGGTGGCAATGCCATTTTTGGGATATCAATTGGGTTCCAGGC 263980 Query 6796 GCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846 | |||| | ||| | |||||| || ||| |||||| |||| || || Sbjct 263979 GGACATTATGATACGTCTGTCCTCCGGGGAATGCTTCAGTTTGTCAATAAC 263929 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 34259 GTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCC 34318 || || ||||||||| |||||||| | | || | || || |||| || || || | Sbjct 263504 GTAGTTGAGGAGCTGTTGTGGTTCATCAAAGGATCAACAAATTCCAAAGAACTGTCAGAC 263563 Query 34319 CGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTC 34378 || ||| | |||||||||| | || || ||| ||| |||| | | || ||| Sbjct 263564 AAAGGCGTGCACATCTGGGACGAAAATGGCTCGCGAAGCTTCTTGGATAGTTGTGGCTTC 263623 Query 34379 CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGG 34438 | |||| ||||| |||||||| || ||||| || ||||| |||||||||||||| Sbjct 263624 ACCGACAGGGATGAGGGTGACTTGGGACCTGTCTATGGTTTCCAATGGAGACACTTTGGT 263683 Query 34439 GCGGAGTAT 34447 || |||||| Sbjct 263684 GCTGAGTAT 263692 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 6898 ATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTC 6957 |||||| || |||||||||||||| ||||| || ||||| || |||||||| ||||| || Sbjct 263692 ATACTCAGCACCAAAGTGTCTCCATTGGAAACCATAGACAGGTCCCAAGTCACCCTCATC 263633 Query 6958 CCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 || | ||| || | | |||| ||| ||| || || | |||||||||| | Sbjct 263632 CCTGTCGGTGAAGCCACAACTATCCAAGAAGCTTCGCGAGCCATTTTCGTCCCAGATGTG 263573 Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTC 7077 ||| || | || || || |||| || || | || | | |||||||| |||||| Sbjct 263572 CACGCCTTTGTCTGACAGTTCTTTGGAATTTGTTGATCCTTTGATGAACCACAACAGCTC 263513 Query 7078 CTCGACCAC 7086 ||| || || Sbjct 263512 CTCAACTAC 263504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448236742580880