Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq914 129 4e-25 >seq914 Length=660061 Score = 129 bits (142), Expect = 4e-25 Identities = 170/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| ||||| ||||||||||| ||| |||||| | || |||||| | Sbjct 533547 ATGCAAATTTTCGTGAAGACTCTTACTGGCAAAACCATTACATTGGAAGTCGAAGCGTCA 533606 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| | ||| ||||| |||||| ||||| ||||| | || || | Sbjct 533607 GATACGATCGAAAAT--GTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCAGATC 533664 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTAC 27966 |||| || || || |||||||||||||| | || |||| |||| |||| ||||||||| Sbjct 533665 AGCAGCGATTGATCTTTGCCGGAAAACAGCTCGAGGACGGCCGCACGCTT-TCCGATTAC 533723 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 ||||| || || || ||||||||||||||| | | |||||||| ||| Sbjct 533724 AACATTCAGAAGGAATCGACTTTGCATTTGGTTCTTAGATTGCGTGGTGGC 533774 Score = 111 bits (122), Expect = 1e-19 Identities = 166/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || || ||||| ||||| ||| |||||| | || |||||| | Sbjct 533319 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAAACCATTACATTGGAAGTCGAAGCGTCA 533378 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| | ||| ||||| |||||| ||||| ||||| | || || | Sbjct 533379 GATACGATCGAAAAT--GTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCTCCAGATC 533436 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTAC 27966 |||| || || || |||||||||||||| | || |||| |||| |||| ||||||||| Sbjct 533437 AGCAGCGATTGATCTTTGCCGGAAAACAGCTCGAGGACGGCCGCACGCTT-TCCGATTAC 533495 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 ||||| || || || ||||||||||||||| | | |||||||| ||| Sbjct 533496 AACATTCAGAAGGAATCGACTTTGCATTTGGTTCTTAGGTTGCGTGGTGGC 533546 Score = 107 bits (118), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--AGCA 27847 ||||||||||| ||||| ||||||||||| ||| || || | || |||||| | || Sbjct 533775 ATGCAAATTTTCGTGAAGACTCTTACTGGCAAAACAATCACTTTGGAGGTCGAAGCATCA 533834 Query 27848 CCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || || | ||| |||||| |||||| || || ||||| | || ||| | Sbjct 533835 GACACAATTGAAAAT--GTCAAAGCAAAAATCCAAGATAAGGAAGGAATCCCACCGGACC 533892 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||| |||| || || || ||||||||| | || |||| |||| | || || |||| Sbjct 533893 AACAAAGGTTGATCTTCGCTGGAAAACAACTTGAAGACGGCCGCACGCTCTCTGACTACA 533952 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||| ||||| || || |||||||||||| | | |||||||| ||| Sbjct 533953 ACATTCAAAAGGAATCAACCTTGCATTTGGTTCTTAGGTTGCGTGGTGGC 534002 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||| ||||| || | || |||||| || || |||| || || || | Sbjct 532863 ATGCAGATTTTCGTGAAGACGTTGACGGGGAAAACCATAACCCTTGAAGTTGAG-GCTTC 532921 Query 27850 G---ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 | ||||| | || || || |||||| ||||| ||||| | || || Sbjct 532922 GGACACGATTGAAAAC--GTGAAGGCAAAAATCCAAGACAAGGAAGGAATCCCCCCAGAT 532979 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTA 27965 ||||| || || || || || |||||||| | || |||| |||| |||| |||||||| Sbjct 532980 CAGCAGCGATTGATCTTCGCTGGAAAACAGCTCGAGGACGGCCGCACGCTT-TCCGATTA 533038 Query 27966 CAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||||| || ||| ||||||||||||||| | || | |||||||| Sbjct 533039 CAACATCCAGAAGGAGTCGACTTTGCATTTGGTTCTTCGGCTTCGTGGCGG 533089 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 27865 GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTT 27924 |||||| ||||| ||||| ||||| | || || ||||| || || || ||| Sbjct 533166 GTCAAAGCTAAAATCCAGGACAAGGAAGGAATCCCTCCAGATCAGCAGCGATTGATCTTT 533225 Query 27925 GCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGC 27984 ||||||||||| | || |||| |||| | ||||| |||||||| |||||||| | Sbjct 533226 GCCGGAAAACAGCTCGAGGACGGCCGCACACTTTCCGACTACAACATTCAAAAAGAATCC 533285 Query 27985 ACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 ||| ||||| |||||||| | | ||||| ||| Sbjct 533286 ACTCTGCATCTGGTTTTGAGACTTCGTGGTGGC 533318 Score = 86.0 bits (94), Expect = 4e-12 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--AGCA 27847 |||||||| || ||||||||||||||||| ||| || ||| | || |||||| | || Sbjct 534003 ATGCAAATCTTCGTGAAAACTCTTACTGGCAAAACAATCACATTGGAAGTCGAAGCATCA 534062 Query 27848 CCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || || | ||| |||||| |||||| || |||||||| | || || | Sbjct 534063 GACACCATTGAAAAT--GTCAAAGCAAAAATTCAGGATAAAGAAGGGATCCCTCCTGATC 534120 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||| | | ||||| || || || || | || |||| ||| | |||||| || |||| Sbjct 534121 AGCAAAGACTGATTTTCGCGGGCAAGCAGCTTGAAGACGGACGTACCTTGTCAGACTACA 534180 Query 27968 ACATCCAAAAAGA 27980 | || ||||| || Sbjct 534181 ATATTCAAAAGGA 534193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355842540542733