Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq921 125 1e-23 >seq921 Length=431717 Score = 125 bits (138), Expect = 1e-23 Identities = 166/226 (73%), Gaps = 12/226 (5%) Strand=Plus/Minus Query 47938 TATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATC 47997 || ||| |||| |||||||||| | | || ||| |||||||| ||||| || || Sbjct 294440 TACAAACCTTTTCAAATCCTAATGCAACGAACAATCTGTCTGCAACAAATTCAATGTAAG 294381 Query 47998 TTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACT 48057 | ||| | | ||||||||||||||| |||| |||||| | ||||| || | || | Sbjct 294380 TACACATGAGTGTACAATTCATTCCTATCAGTTCAACTGGCAACGCCTCTGTTAAGAATT 294321 Query 48058 CTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTAC-CGTTTCCTCAC-TTGG--- 48112 ||| |||||| |||||||||| |||||| ||| |||| || | | || |||| Sbjct 294320 CTTTTTCGATTTCCACAGCATCCATTATTATTGATTTTACGCGCT--CAAACGTTGGCTT 294263 Query 48113 -TGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATG 48157 || ||| | ||||||||||||||||||||||||||| ||||| Sbjct 294262 TTGTATA----ATATGTTTAAACATTAAACATGCAAAATCGCAATG 294221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694629038894560