Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ooceraea_20biroi_20[refseq_20GCF_5F000611835.1_202014-04-08] 4,579 sequences; 212,825,769 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq921 118 2e-21 >seq921 Length=431717 Score = 118 bits (130), Expect = 2e-21 Identities = 158/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 46427 TATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACG 46486 || ||| |||| |||||||||| | | || ||| |||||||| ||||| || || | Sbjct 294440 TACAAACCTTTTCAAATCCTAATGCAACGAACAATCTGTCTGCAACAAATTCAATGTAAG 294381 Query 46487 TTTTCATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACT 46546 | ||| | | ||||||||||||||| |||| || || | ||||| || | || | Sbjct 294380 TACACATGAGTGTACAATTCATTCCTATCAGTTCAACTGGCAACGCCTCTGTTAAGAATT 294321 Query 46547 CTTGTTCAATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGAT 46606 ||| ||| || ||||||||| |||||| ||| |||| || |||| | Sbjct 294320 CTTTTTCGATTTCCACAGCATCCATTATTATTGATTTTACGCGCTCAAACGTTGGCTTTT 294261 Query 46607 GCATCAAATGTTTAAACATTAAACATGCAAAATCACAATG 46646 | || | ||||||||||||||||||||||||||| ||||| Sbjct 294260 GTATAATATGTTTAAACATTAAACATGCAAAATCGCAATG 294221 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 46671 TTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGC 46730 ||||||| || || || || ||||| ||||| |||||||| | ||| ||||| || || Sbjct 294062 TTCGTTACTGAAAGTAAGACCTGGCATAAGTCCTCGCTTTTTTAACCAGAATATCGCAGC 294003 Query 46731 GAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTA 46790 ||| ||| || || ||||| || || ||||||||||| |||| | | ||| | | Sbjct 294002 AAAACTGCCACTGAAAAAGATGCCCTCAACTGCCGCGAATGCAACAA--CACGCTCGGGA 293945 Query 46791 ACTG--GCA---TCATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAA 46845 | || ||| |||| || ||||| || ||||||| |||||| ||| | ||||| Sbjct 293944 AATGCAGCACTCTCATGATTGATCCAGTTTAATGCCCAATTAGCCTTCTTCCTAACACAG 293885 Query 46846 GGCATTGTTTCTATAGCATTAAAGAGAAAGT 46876 || | || || | |||||||| | ||||| Sbjct 293884 GGAAGCGTCTCGAGCGCATTAAATAAAAAGT 293854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712893593417280