Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq137 87.8 2e-12
>seq137
Length=194913
Score = 87.8 bits (96), Expect = 2e-12
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || ||||||||||| || |||||| || ||||||| |||||||| || |||||
Sbjct 27391 ATGTAAGTATCGATGAGCAGAGAGTACATCTCTGAGTGTACATTCTCCATTGCAATCTGG 27450
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
||||| || ||||||| ||||| | | || ||||| |||||| ||| | |
Sbjct 27451 AATCCATAGAAGCATCTTGCTTCAGTGACCTGCACTTCTTGAGAGAATCTCTCCACCAAG 27510
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAA 17409
|| || || || ||||| ||| || ||||| || |||| | || || |||||
Sbjct 27511 TTCTCATTGACAATGCCATCGGAGGCCGCGAAGAAAGCCAGGACGTGTTTGATGAA 27566
Score = 82.4 bits (90), Expect = 8e-11
Identities = 136/194 (70%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074
||||||| ||||||||| || |||||||| | ||| ||||| | ||||| ||
Sbjct 23402 AATGTCAGACCGGGCATCAGACCGCGTTTCTTCATCCAGAATATAGACGCGAAGCTGCCC 23461
Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCG-CGTC 17133
|| |||||||| |||||||||||||| || || | | || ||| || | || | ||||
Sbjct 23462 GAGAAGAATATGCCCTCGACGGATGCGAATGCCACGATGCGCTCGCCGAAGGTGGCCGTC 23521
Query 17134 TTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTC 17193
||| | | ||||| | || |||| || || || | ||| | ||| || ||| ||
Sbjct 23522 -TTGCTGCCGATCCACTGGAGCGCCCAGTCCGCCTTCTTCTTGACGCACGGCAGCGTCTC 23580
Query 17194 TATGGCCTTAAATA 17207
| ||| || ||||
Sbjct 23581 CACGGCGTTGAATA 23594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517378685074680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |