Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq754 266 3e-66 seq4530 122 7e-23 seq3481 111 1e-19 seq7758 89.7 4e-13 seq7468 89.7 4e-13 >seq754 Length=177731 Score = 266 bits (294), Expect = 3e-66 Identities = 593/883 (67%), Gaps = 13/883 (1%) Strand=Plus/Plus Query 102164 ACGCCCGTCCACCCGCGGCCGTACATGGCGACGCCCACGATGAGTTTGTGGGCCGCTACG 102223 || || ||||| || ||||||||||| || || || |||| | || | || || Sbjct 50726 ACTCCAGTCCATCCTCGGCCGTACATAGCAACACCTACGACAATCTTCTTGGGGTTAACA 50785 Query 102224 CCTTGGCCCGTGAGCAACTTCACGGCGTGGTCGGTGGTGTACAGCTCGTTGGCGTTCCAA 102283 ||||| | || || ||||| | || |||||||| ||| |||| |||| Sbjct 50786 CCTTGAGCGAGCAGGAATTTCACTCCAAAATCAGTGGTGTAAGTCTCCTTGGGCATCCAC 50845 Query 102284 CTGGGCGCGTACAGCGTGGTCTGGTAGCCCAA---ATCCGTGTTGGACCACGCGCCCTTA 102340 || |||||||| | ||||||| || | ||| || ||||| || || ||| Sbjct 50846 GCAGGAGCGTACAGAGATGTCTGGTGTCCGAGGGTATCA---TTAGACCAGGCTCCTTTA 50902 Query 102341 AAATCGTAACTCATGAGGAATATTTTATCAAGGAACCTTTGAGCCGCGTCGTACTTCACC 102400 || ||||| ||||| ||||| || | || | | || | || || ||| ||| | ||| Sbjct 50903 AAGTCGTAGCTCATCAGGAAGATATGGTCCATGTACTTCTGGGCAGCGCTGTAGTCGACC 50962 Query 102401 ACGGCAATTTTGTCGTAGCCCGAACTAATCGCGCTCGTCAGCTCGTACGTCTTGTTCGTT 102460 || || ||||| | || | ||| || ||| ||||||||||| |||| ||| Sbjct 50963 ACTTGGATCTTGTCCCAACCGGCACTGATGGCGGAAGTCAGCTCGTATTTCTTACCAGTT 51022 Query 102461 TGCAGCTGC-AGTTCGTCCAGCATGGCGCGCAACTCTTTCAGCAAAACAAGGTACGTGTC 102519 | |||| | || || | |||||| | || | || |||| | ||| ||| | Sbjct 51023 T-CAGCGGATAGCTCATTGAGCATGTCACGTATTTCCTTCATGAGTTCAACGTAGACATG 51081 Query 102520 GGCGTCGCGCTCGCCGTTGCCGAGCGCCGGGTTGGCGCCCTTGCCGCCCGGAAACTCCCA 102579 | |||| ||| | || || | |||||||| || ||||| || || |||||||| Sbjct 51082 GCCGTC---CTCAGGGCCTCCAAGGTCAGGGTTGGCACCTTTGCCTCCAGGGAACTCCCA 51138 Query 102580 ATCGATGTCCACCCCGTCGAAAAACTTCCACACCTGCAAAAACTCTTTAACGGATTCGAC 102639 |||||| || || || ||||| || ||||| |||| || ||||| || ||| |||| Sbjct 51139 ATCGATATCAACACCATCGAAGAATTTCCAAGTTTGCAGGAAGTCTTTCACCGATGCGAC 51198 Query 102640 AAACACGCGC-CGCTTGTCCGCGTCGTGCATGAAATAGAACGGGTCGGACAGCGTCCAGC 102698 || ||| | | |||| | ||| | | |||| |||| || || | ||| ||||||| Sbjct 51199 GAA-ACGGTCTCTCTTGGTCTTGTCATTTAAGAAAAAGAATGGATCAGCCAGGGTCCAGC 51257 Query 102699 CGCCAATGGACGGCAGGATTTTCAAATGCGGGTTTGCCAGCTTGGCCGCCATCAACTGGC 102758 | || ||||| || |||||||||| | || || || | || | ||| | ||||| Sbjct 51258 CACCGATGGATGGGAGGATTTTCAGGTCAGGTTTCGCTTGTTTCAACATCATGAGCTGGC 51317 Query 102759 CAAAGTTGCCTTTGTAGGGCTCGTTCCATGCGGATACGCCCTTTTGCGGCTTTTGTATGG 102818 | || ||||||||||| || |||||||| | || | || || || || || || | || Sbjct 51318 CGAAATTGCCTTTGTAAGGTTCGTTCCAAGAAGACAGACCTTTCTGGGGTTTCTGCAAGG 51377 Query 102819 CGGCCCACGGGTCGTGGATAGCGACCTTAAAGTCTGCGCGGCCTTTGCACGAGCGCTGCA 102878 | ||||| || || ||||| | || || ||||| | ||||| |||| || || |||| Sbjct 51378 CTGCCCATGGATCATGGATTGTCACTTTGAAGTCCTCTCGGCCGCTGCAGGAACGTTGCA 51437 Query 102879 GCGCTTCAAAACTGCCGGGAATGGTCTTGAGCGCGTCGTTTAGCCCGTCGCCGCCGCAAA 102938 | |||| |||||||| || ||| | |||||| | || || || ||||||| Sbjct 51438 GAGCTTGGAAACTGCCTTCGATCTCCTTCAAACTGTCGTTAATGCCATCACCTCCGCAAA 51497 Query 102939 TCGGGATGAAGCCGTACAGCAGATGGGACAGGTTGGGCAGCGGCACTTTGTCCACCGGAA 102998 | |||||||| |||||||| ||||| | || || || | || | |||||| |||| Sbjct 51498 TTGGGATGAAACCGTACAGGAGATGCGTGAGATTTGGTACTGGGATACGGTCCACTGGAA 51557 Query 102999 AGCCGCGGCCGTACACGCCCCACTCTACGAAATACGCGGCCAC 103041 | | | |||||||||||| || ||||| || || |||| Sbjct 51558 ACTTTCTGGGGTACACGCCCCATTCGACGAAGTAAGCTCCCAC 51600 >seq4530 Length=43051 Score = 122 bits (134), Expect = 7e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| || | ||| || ||||| || ||||| ||||| | | Sbjct 13919 CCACCACGCAGACGCAGTACCAAGTGTAGAGTAGATTCCTTCTGGATGTTGTAGTCTGAC 13978 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | || || |||||||| || ||| | ||||||||||||||||| ||| Sbjct 13979 AGTGTGCGGCCATCTTCTAGCTGTTTTCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 14038 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| || ||||| |||||| ||| || | ||| |||||| | ||||| Sbjct 14039 ATGCCCTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTATCAGCAGGCTCGACC 14098 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 |||| || |||||||| || || ||||| || || || || ||||| |||| Sbjct 14099 TCCAAAGTGATGGTCTTACCAGTCAACGTCTTCACGAAGATCTGCATATTGA 14150 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| || || ||||| | ||| | ||| ||||||||||||||||| ||||| | Sbjct 11636 TTCCACCTCTCAATCTAAGCACAAGATGTAGAGTTGACTCCTTTTGAATGTTGTAGTCTG 11695 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| || || | || || || || ||||| || | || || | ||||||||| || Sbjct 11696 ACAGTGTGCGGCCATCTTCAAGTTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGG 11755 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||||||| ||| ||| || || | ||| || || | ||| Sbjct 11756 GGATGCCTTCCTTGTCTTGGATTTTTGCCTTAACATTCTCGATTGTGTCGGAAGCCTCAA 11815 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | ||||| ||||| || ||||| Sbjct 11816 CCTCGAGTGTGATGGTCTTGCCAGTCAGTGTTTTTACAAAGATCTGCAT 11864 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| || | ||| |||||||| || ||||| ||||| | | Sbjct 12779 CCACCACGCAGACGCAGTACCAAGTGTAGAGTAGACTCCTTCTGGATGTTGTAGTCTGAC 12838 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | || || |||||||| || ||| | |||||||||||||||||| ||| Sbjct 12839 AGTGTGCGGCCATCTTCTAGCTGTTTTCCGGCAAAGATAAGTCTCTGCTGGTCCGGGGGA 12898 Query 21069 ACGCCTTCCTTGTC 21082 | |||||| ||||| Sbjct 12899 ATGCCTTCTTTGTC 12912 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| || | |||||||| || |||||||| ||||| | | Sbjct 13691 CCACCGCGCAGACGTAGCACCAAGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAC 13750 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | || || |||||||| || ||| | ||||||||||||||||| ||| Sbjct 13751 AGTGTGCGGCCATCTTCTAGCTGTTTTCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 13810 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| || ||||| ||| || || || | | | |||||| | ||| Sbjct 13811 ATGCCCTCTTTGTCCTGGATTTTGGCCTTTACGTTCTCAATAGTATCGGAAGCCTCAACC 13870 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||||| || ||||| || || || || || || ||||| Sbjct 13871 TCAAGAGTAATGGTTTTACCGGTCAAGGTCTTAACGAAGATCTGCAT 13917 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 |||||||| || |||||||| ||||| | ||| || || | || || |||||||| || Sbjct 13265 GTGGACTCTTTCTGAATGTTGTAGTCTGACAGTGTGCGGCCATCTTCTAGCTGTTTTCCG 13324 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | |||||||||||||||||| ||| | ||| || ||||| ||| || || Sbjct 13325 GCAAAGATAAGTCTCTGCTGGTCCGGGGGAATGCCCTCTTTGTCCTGGATTTTGGCCTTT 13384 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | |||||| | ||| || | |||||||| || ||||| || || Sbjct 13385 ACATTCTCAATAGTATCGGAAGCCTCAACCTCAAGAGTAATGGTTTTACCGGTCAAGGTC 13444 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 13445 TTAACGAAGATCTGCAT 13461 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || ||||| || |||||||| ||||| | ||| || || | || || |||||||| || Sbjct 13493 GTCGACTCTTTCTGAATGTTGTAGTCTGACAGTGTGCGGCCATCTTCTAGCTGTTTTCCG 13552 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 ||| | |||||||||||||||||| ||| | |||||||||||| Sbjct 13553 GCAAAGATAAGTCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTC 13596 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| || | || || || || |||||||| ||||| | Sbjct 12094 CCACCGCGCAGACGCAGCACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCAGAT 12153 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | || || ||||| ||||| || ||||||||||||||||||| || Sbjct 12154 AGAGTGCGTCCATCTTCTAGCTGCTTGCCAGCGAAAATAAGTCTCTGCTGGTCTGGAGGA 12213 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| || || ||| || ||| || | | | ||| ||| || ||| | Sbjct 12214 ATACCTTCTTTATCCTGGATTTTGGCTTTTACGTTCTCAATAGTGTCAGAGGCCTCAACT 12273 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || || ||||| |||| ||||| || || |||||||| Sbjct 12274 TCCAAAGTTATAGTTTTGCCAGTTAGAGTTTTAACGAAAATTTGCAT 12320 >seq3481 Length=53562 Score = 111 bits (122), Expect = 1e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005 || || |||| ||||||||||||| || | ||| || ||||| || || || || || Sbjct 24281 TTACCTCCTCTTAGCCTGAGCACCAAGTGAAGAGTAGATTCCTTCTGGATATTGTAATCG 24222 Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065 | |||||| || | || |||||||||||||| || | || || | |||||||||| Sbjct 24221 GACAGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGC 24162 Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125 || | || ||||| || ||||| ||||| | | | || || || |||| Sbjct 24161 GGAATACCCTCCTTATCCTGAATCTTGGCCTTCACGTTCTCAATGGTGTCCGAGGCCTCC 24102 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||| |||||||| ||||||| |||||||| || || ||||||||| Sbjct 24101 ACCTCAAGGGTGATGGTCTTCCCGGTTAGGGTTTTGACGAAAATCTGCATTTTG 24048 >seq7758 Length=23446 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 38729 GGCGGCGTGGGGCTGAACCTGACCGGCGGCAACCACATCATCATGCTGGAGCCGCACTGG 38788 ||||||||||| | |||||| ||||| ||||| | | |||| || ||||||||| Sbjct 19648 GGCGGCGTGGGCATCAACCTGTGCGGCGCAAACCATCTGCTGCTGCTCGACCCGCACTGG 19589 Query 38789 AACCCGCAAATTGAGCTGCAGGCGCAAGACCGCATCCACCGCATGGGCCAGAAAAAG 38845 |||||||| | ||| ||||||||| ||||||||| || | |||| ||||| ||| Sbjct 19588 AACCCGCAGCTGGAGGAGCAGGCGCAGGACCGCATCTACAGGGTGGGACAGAAGAAG 19532 >seq7468 Length=24208 Score = 89.7 bits (98), Expect = 4e-13 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 28810 GTACATGCGCACCGCTTTGTCTAACTGACCGC-GGCAAACGGGGCACGTGGTCACGCCCG 28868 ||| | ||||||||| |||| ||| | |||| |||| | ||||||| || | | Sbjct 18943 GTAGAGGCGCACCGCGTTGTGGAAC-GTCCGCCGGCACATGGGGCACTTGTTGGTGGAGA 19001 Query 28869 CAGCGCACTTGCCGCACGCCACCACGTGCCCGCAGGGCACAAAGCACACGGTCTTTTCGG 28928 ||||||||| |||||||||||||||||||||| ||||| ||||||||| | || Sbjct 19002 GCGCGCACTTGGCGCACGCCACCACGTGCCCGCACGGCACGAAGCACACGTTGCGCTCCT 19061 Query 28929 CGCCGAGGCAAATCTTGCACAGC 28951 | || ||| |||||||||||| Sbjct 19062 CCACGTAGCAGATCTTGCACAGC 19084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422126420726516