Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq4530 131 3e-25
seq3754 105 1e-17
seq3664 105 1e-17
>seq4530
Length=43051
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || ||||| ||||||||||||||| | || |||| || |
Sbjct 12320 ATGCAAATTTTCGTTAAAACTCTAACTGGCAAAACTATAACTTTGGAAGTTGAGGCCTCT 12261
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| || ||||| ||||| || |||||||||||||| || || || ||
Sbjct 12260 GACACTATTGAGAACGTAAAAGCCAAAATCCAGGATAAAGAAGGTATTCCTCCAGACCAG 12201
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || |||||||| || || || || |||| ||| | || || || || || ||
Sbjct 12200 CAGAGACTTATTTTCGCTGGCAAGCAGCTAGAAGATGGACGCACTCTATCTGACTACAAC 12141
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| ||||||||||| | || ||||| | ||| | || ||||||||
Sbjct 12140 ATTCAGAAAGAATCAACCCTTCACTTGGTGCTGCGTCTGCGCGGTGGTAT 12091
Score = 127 bits (140), Expect = 3e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| |||| ||||| || ||||| || || ||| | ||| | || ||
Sbjct 12092 ATGCAGATCTTTGTAAAAACACTGACTGGCAAGACCATCACTCTTGAGGTAGAGGCCTCC 12033
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||||||| ||| ||||| ||||| ||||||||||| ||||| || || || ||
Sbjct 12032 GATACAATTGAGAATGTAAAAGCCAAAATCCAAGATAAAGAGGGTATTCCTCCAGACCAG 11973
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || ||||| ||||| || || || | || ||| | || || ||| || || ||
Sbjct 11972 CAGAGACTTATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACCTTATCGGACTACAAC 11913
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| ||||| ||||| | || ||||| | ||| | || ||||||||
Sbjct 11912 ATTCAGAAAGAGTCAACCCTTCACTTGGTGCTGCGTCTGCGCGGTGGTAT 11863
Score = 91.5 bits (100), Expect = 2e-13
Identities = 163/238 (68%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || ||||||| | || ||||| || || || | ||| |||||||
Sbjct 12548 ATGCAGATCTTCGTAAAGACTTTGACTGGCAAGACCATTACACTTGAGGTTGAAGCTTCC 12489
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| ||| ||| | ||| ||||| || || || ||||| || || || || ||
Sbjct 12488 GATACGATTGAGAATGTTAAAGCTAAAATCCAGGACAAGGAAGGCATCCCCCCAGACCAG 12429
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | ||||| || || ||||| ||| | || || | || ||| | || || ||
Sbjct 12428 CAGCGTCTTATCTTCGCCGGAAAGCAACTGGAAGACGGACGCACACTGTCCGACTACAAC 12369
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||||| ||||| || || | ||||| || || || | ||||||||||| ||| ||
Sbjct 12368 ATTCAGAAAGAGTCGACGCTTCATTTAGTATTGCGCCTTCGAGGTGGTATGCAAATTT 12311
>seq3754
Length=50117
Score = 105 bits (116), Expect = 1e-17
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| || | ||||| || || ||||||||||||||| | || | || ||
Sbjct 543 AATGCAAATTTTCGTCAAGACCCTTACTGGCAAAACTATAACTCTTGAAGTCGAGGCTTC 602
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| ||| ||| | || || || ||||| || || || || || || || ||
Sbjct 603 AGATACCATTGAAAATGTGAAGGCTAAGATACAAGACAAGGAGGGCATTCCCCCAGACCA 662
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||| | | || ||||| || || ||| | || ||| | || || | ||||||||
Sbjct 663 ACAGCGTTTGATCTTTGCCGGGAAGCAACTTGAAGATGGCCGCACCCTTTCTGATTATAA 722
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||||| ||||| || | || ||||| || ||| | |||||||||||
Sbjct 723 CATTCAAAAGGAATCCACCCTTCACTTGGTATTGCGTCTCCGAGGTGGTAT 773
Score = 104 bits (114), Expect = 4e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| || ||||||||||| |||||| | || |||| || |
Sbjct 1456 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAAACAATAACTTTGGAAGTTGAGGCTTCT 1515
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| |||| || || ||||| ||||| || || || || || ||
Sbjct 1516 GACACCATTGAGAATGTAAAGGCTAAGATCCAAGACAAAGAGGGAATTCCGCCAGACCAG 1575
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | || ||||| || || ||||| | ||||| | || || | ||||| ||
Sbjct 1576 CAGCGTCTGATTTTCGCTGGCAAACAGCTGGAGGACGGACGCACTCTGTCGGATTACAAC 1635
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765
|| ||||||||||| || | ||||||||| | ||| | || || ||
Sbjct 1636 ATCCAAAAAGAATCCACCCTTCATTTGGTTCTTCGTCTTCGCGGCGG 1682
Score = 96.9 bits (106), Expect = 5e-15
Identities = 164/238 (69%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | ||||| || ||||| ||||| || || | || | |||||
Sbjct 772 ATGCAAATCTTTGTGAAGACCCTGACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCA 831
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || || | || ||||||||||| || ||||| || || || || ||
Sbjct 832 GACACCATCGAGAACGTCAAGGCTAAAATTCAAGACAAGGAAGGCATCCCCCCCGACCAG 891
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || || || || || ||||||||| | || ||| | || || | ||||| ||
Sbjct 892 CAGAGACTCATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTCTCCGATTACAAC 951
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|| ||||||||||| || | || ||||| || ||| | || ||||| || ||| ||
Sbjct 952 ATCCAAAAAGAATCTACCCTCCACTTGGTATTGCGTCTCCGTGGTGGAATGCAAATTT 1009
Score = 96.9 bits (106), Expect = 5e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| || | ||||| || || ||||||||||||||| | || | || ||
Sbjct 1227 AATGCAAATTTTCGTCAAGACCCTTACTGGCAAAACTATAACTCTTGAAGTCGAGGCTTC 1286
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| ||| ||| | || || || ||||| || || || || || || || ||
Sbjct 1287 AGATACCATTGAAAATGTGAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCA 1346
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||| | | || ||||| || || || |||| || |||| || | ||||| ||
Sbjct 1347 ACAGCGTTTGATCTTTGCCGGGAAGCAGCTAGAAGACGGTCGCACCCTTTCTGATTACAA 1406
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||| || || ||||| ||| | || ||||| || ||| | ||||| |||||
Sbjct 1407 TATCCAGAAGGAATCCACTCTTCACTTGGTATTGCGTCTCCGAGGAGGTAT 1457
>seq3664
Length=101255
Score = 105 bits (116), Expect = 1e-17
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| || | ||||| || || ||||||||||||||| | || | || ||
Sbjct 95005 AATGCAAATTTTCGTCAAGACCCTTACTGGCAAAACTATAACTCTTGAAGTCGAGGCTTC 95064
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| ||| ||| | || || || ||||| || || || || || || || ||
Sbjct 95065 AGATACCATTGAAAATGTGAAGGCTAAGATACAAGACAAGGAGGGCATTCCCCCAGACCA 95124
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||| | | || ||||| || || ||| | || ||| | || || | ||||||||
Sbjct 95125 ACAGCGTTTGATCTTTGCTGGGAAGCAACTTGAAGATGGCCGCACCCTTTCTGATTATAA 95184
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||||| ||||| || | || ||||| || ||| | |||||||||||
Sbjct 95185 CATTCAAAAGGAATCCACCCTTCACTTGGTATTGCGTCTCCGAGGTGGTAT 95235
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| || ||||||||||| || || | || | |||||
Sbjct 93866 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAAACCATCACACTCGAAGTAGAAGCTTCG 93925
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || ||| | || ||||||||||| || ||||| ||||| || || ||
Sbjct 93926 GACACCATCGAGAATGTCAAGGCTAAAATTCAAGACAAGGAAGGCATACCCCCAGACCAG 93985
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || || || ||||| ||||| ||| | || ||| | || || | || || |||
Sbjct 93986 CAGAGACTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACCCTCTCCGACTACAAT 94045
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| || || ||||| ||| | || ||||| || ||| | ||||| |||||
Sbjct 94046 ATCCAGAAGGAATCCACTCTTCACTTGGTATTGCGTCTCCGAGGAGGTAT 94095
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | ||||| || ||||| ||||| || || | || | |||||
Sbjct 95234 ATGCAAATCTTTGTGAAGACCCTGACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCA 95293
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | || |||||||||||||| ||||| || || || || ||
Sbjct 95294 GACACCATTGAGAATGTCAAGGCTAAAATTCAAGATAAGGAAGGCATCCCCCCAGACCAG 95353
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || || || ||||| ||||| ||| | || ||| | || || | || || ||
Sbjct 95354 CAGAGACTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACTCTCTCCGACTACAAC 95413
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||||||||| || | ||| |||| || ||| | || ||||| ||
Sbjct 95414 ATCCAAAAAGAATCTACCCTCCATCTGGTATTGCGTCTCCGCGGTGGCAT 95463
Score = 104 bits (114), Expect = 4e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| || ||||||||||| |||||| | || |||| || |
Sbjct 95918 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAAACAATAACTTTGGAAGTTGAGGCTTCT 95977
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| |||| || || ||||| ||||| || || || || || ||
Sbjct 95978 GACACCATTGAGAATGTAAAGGCTAAGATCCAAGACAAAGAGGGAATTCCGCCAGACCAG 96037
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | || ||||| || || ||||| | ||||| | || || | ||||| ||
Sbjct 96038 CAGCGTCTGATTTTCGCTGGCAAACAGCTGGAGGACGGACGCACTCTGTCGGATTACAAC 96097
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765
|| ||||||||||| || | ||||||||| | ||| | || || ||
Sbjct 96098 ATCCAAAAAGAATCCACCCTTCATTTGGTTCTTCGTCTTCGCGGCGG 96144
Score = 102 bits (112), Expect = 1e-16
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| ||| | ||||| || || |||||||| || ||| | ||| |||| |||
Sbjct 94321 AATGCAAATTTTTGTCAAGACCCTGACGGGCAAAACAATCACTTTGGAGGTTGAGGCATC 94380
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| || | || ||||| ||||| || || || || || || || ||
Sbjct 94381 GGACACCATTGAGAACGTCAAGGCTAAAATCCAAGACAAGGAGGGCATTCCCCCAGACCA 94440
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||| | | || ||||| ||||| ||| | || ||| | || || | ||| || ||
Sbjct 94441 ACAGCGTTTAATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACCCTCTCAGACTACAA 94500
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||||||||| || | ||| |||| || ||| | || ||||| ||
Sbjct 94501 CATCCAAAAAGAATCTACCCTCCATCTGGTATTGCGTCTCCGTGGTGGAAT 94551
Score = 96.9 bits (106), Expect = 5e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| || | ||||| || || ||||||||||||||| | || | || ||
Sbjct 95689 AATGCAAATTTTCGTCAAGACCCTTACTGGCAAAACTATAACTCTTGAAGTCGAGGCTTC 95748
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| ||| ||| | || || || ||||| || || || || || || || ||
Sbjct 95749 AGATACCATTGAAAATGTGAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCA 95808
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||| | | || ||||| || || || |||| || |||| || | ||||| ||
Sbjct 95809 ACAGCGTTTGATCTTTGCCGGGAAGCAGCTAGAAGACGGTCGCACCCTTTCTGATTACAA 95868
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||| || || ||||| ||| | || ||||| || ||| | ||||| |||||
Sbjct 95869 TATCCAGAAGGAATCCACTCTTCACTTGGTATTGCGTCTCCGAGGAGGTAT 95919
Score = 91.5 bits (100), Expect = 2e-13
Identities = 163/238 (68%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| || ||||| ||||| || || | || | |||||
Sbjct 94094 ATGCAGATCTTTGTGAAGACCCTCACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCA 94153
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || || | || ||||||||||| || ||||| || || || || ||
Sbjct 94154 GACACCATCGAGAACGTCAAGGCTAAAATTCAAGACAAGGAAGGCATCCCCCCCGACCAG 94213
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || || || || || ||||||||| | || ||| | || || | ||||| ||
Sbjct 94214 CAGAGACTCATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTCTCCGATTACAAC 94273
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|| ||||||||||| || | || ||||| || ||| | || ||||| || ||| ||
Sbjct 94274 ATCCAAAAAGAATCTACCCTCCACTTGGTATTGCGTCTCCGTGGTGGAATGCAAATTT 94331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755212355996800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |