Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq3754 105 1e-17 seq3664 105 1e-17 >seq3754 Length=50117 Score = 105 bits (116), Expect = 1e-17 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | || | |||||||| || | ||| |||||||| ||||| ||||| | Sbjct 544 TTCCACCGCGGAGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAG 485 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | || ||| || | |||||||||||| || ||||||| || || || || | Sbjct 484 AAAGGGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGG 425 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 | ||||||||||| ||||| || || ||| ||||| Sbjct 424 GGATTCCTTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATGGTGTCCGAAGCTTCTA 365 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| |||||||| ||||||||||| | || || | || || ||||| Sbjct 364 CTTCAAGTGTGATGGTTTTACCTGTGAGGGTCTTCACAAAGATCTGCAT 316 Score = 102 bits (112), Expect = 1e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | || | |||||||| || | ||| |||||||| ||||| ||||| | Sbjct 1228 TTCCACCGCGGAGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAG 1169 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | || ||| || | |||||||||||| || ||||||| || || || || | Sbjct 1168 AAAGGGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGG 1109 Query 146169 GAATTCCTTCTTTATCTTG 146187 | ||||||||||| ||||| Sbjct 1108 GGATTCCTTCTTTGTCTTG 1090 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 |||||||| || | ||| |||||||| ||||| ||||| ||||| || | || ||| Sbjct 299 AATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAAAGGGTACGGCCATCT 240 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 || | |||||||||||| || ||||||| || || || || || ||||||||||| ||| Sbjct 239 TCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGGATTCCTTCTTTGTCT 180 Query 146186 TG 146187 || Sbjct 179 TG 178 Score = 96.9 bits (106), Expect = 5e-15 Identities = 154/229 (67%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | || | |||||||| || | ||||||||||| || || ||||| | Sbjct 1000 TTCCACCACGGAGACGCAATACCAAGTGGAGGGTAGATTCTTTTTGGATGTTGTAATCGG 941 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || || | || ||| || | |||||||||||| || || | ||| ||||| || || | Sbjct 940 AGAGGGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATGAGTCTCTGCTGGTCGGGGG 881 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 | || ||||| || ||||| || |||||| ||||| Sbjct 880 GGATGCCTTCCTTGTCTTGAATTTTAGCCTTGACGTTCTCGATGGTGTCTGAAGCTTCTA 821 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| |||||||| ||||||||||| | || || | || |||||||| Sbjct 820 CTTCGAGTGTGATGGTTTTACCTGTCAGGGTCTTCACAAAGATTTGCAT 772 >seq3664 Length=101255 Score = 105 bits (116), Expect = 1e-17 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | || | |||||||| || | ||| |||||||| ||||| ||||| | Sbjct 95006 TTCCACCGCGGAGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAG 94947 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | || ||| || | |||||||||||| || ||||||| || || || || | Sbjct 94946 AAAGGGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGG 94887 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 | ||||||||||| ||||| || || ||| ||||| Sbjct 94886 GGATTCCTTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATGGTGTCCGAAGCTTCTA 94827 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| |||||||| ||||||||||| | || || | || || ||||| Sbjct 94826 CTTCAAGTGTGATGGTTTTACCTGTGAGGGTCTTCACAAAGATCTGCAT 94778 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 |||||||| || | ||| |||||||| ||||| ||||| ||||| || | || ||| Sbjct 94761 AATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAAAGGGTACGGCCATCT 94702 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 || | |||||||||||| || ||||||| || || || || || ||||||||||| ||| Sbjct 94701 TCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGGATTCCTTCTTTGTCT 94642 Query 146186 TG 146187 || Sbjct 94641 TG 94640 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/212 (68%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 ||||||| ||| | ||||||||||| || || || || || ||||| | || ||| Sbjct 95445 AATACCAGATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCT 95386 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 || | ||| ||||||||||| || | ||| ||||| || || || || ||||| |||||| Sbjct 95385 TCAAGTTGCTTTCCAGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCT 95326 Query 146186 TGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTT 146245 || || |||||| ||||||||| |||||||| ||| Sbjct 95325 TGAATTTTAGCCTTGACATTCTCAATGGTGTCTGAAGCTTCTACTTCGAGTGTGATGGTT 95266 Query 146246 TTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||||||| | || || | || |||||||| Sbjct 95265 TTACCTGTCAGGGTCTTCACAAAGATTTGCAT 95234 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | || | |||||||| || | ||| |||||||| ||||| ||||| | Sbjct 95690 TTCCACCGCGGAGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAG 95631 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | || ||| || | |||||||||||| || ||||| | || || || || | Sbjct 95630 AAAGGGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGCG 95571 Query 146169 GAATTCCTTCTTTATCTTG 146187 | ||||||||||| ||||| Sbjct 95570 GGATTCCTTCTTTGTCTTG 95552 Score = 93.3 bits (102), Expect = 6e-14 Identities = 153/229 (67%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | || | |||||||| || | ||||||||||| || || ||||| | Sbjct 94322 TTCCACCACGGAGACGCAATACCAAGTGGAGGGTAGATTCTTTTTGGATGTTGTAATCGG 94263 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || || | || ||| || | |||||||||||| || || | ||| ||||| || || | Sbjct 94262 AGAGGGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATGAGTCTCTGCTGGTCGGGGG 94203 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 | || ||||| || ||||| || |||||| ||||| Sbjct 94202 GGATGCCTTCCTTGTCTTGAATTTTAGCCTTGACGTTCTCGATGGTGTCTGAAGCTTCTA 94143 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| |||||||| ||||||||||| | || || | || || ||||| Sbjct 94142 CTTCGAGTGTGATGGTTTTACCTGTGAGGGTCTTCACAAAGATCTGCAT 94094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743286603441920