Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq955 109 1e-18 >seq955 Length=106330 Score = 109 bits (120), Expect = 1e-18 Identities = 268/406 (66%), Gaps = 3/406 (1%) Strand=Plus/Plus Query 249031 CAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGAC 249090 ||||| ||| ||||| || | |||||| | |||||| |||| ||||| || ||| Sbjct 58727 CAGCTCTCCTCCTGCTTCCTCATCGCCATGAAGGACGACAGCATCGAGGGCATCTACGAC 58786 Query 249091 ACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCC 249150 ||||| ||||| ||| || || |||| |||||||| ||||| | ||| | Sbjct 58787 ACGCTCAAACATTGCGCGCTCATCTCCAAATCAGCGGGCGGTATCGGCGTTCACGTACAC 58846 Query 249151 AACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTA 249210 |||||| || ||||| || |||||| || || || || ||| | || ||||| Sbjct 58847 TGCATCCGCGCCAAGGGATCCTACATCGCCGGAACCAACGGCGTCTCCAACGGCCTCGTA 58906 Query 249211 CCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGA 249267 ||| | || || || | | ||| || |||| | || |||| | |||| | ||| Sbjct 58907 CCCATGCTCCGCGTCTATAACAACACAGCTAGGTACGTCGACCAAGGCGGGAACAAACGA 58966 Query 249268 AAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGAC 249327 || | ||||| | || | || ||||||||| |||||||| |||||| |||| Sbjct 58967 CCCGGCGCCTTCGCGGTCTACCTCGAGCCGTGGCACGCGGATATATTTGAGTTCTTGGAT 59026 Query 249328 TTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGG 249387 | || || |||| || || ||| | | || | || || || || || || ||| Sbjct 59027 CTCAAGAAAAACACTGGGAAGGAGGAAGTTCGCGCAAGAGAGCTTTTTTATGGGCTCTGG 59086 Query 249388 GTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGA 249433 | | |||||||||||| | ||| || | ||||||| |||| Sbjct 59087 ATACCAGACTTGTTCATGAAAAGAGTCGAGAGCAACGGCGAATGGA 59132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073411439336768