Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq955 109 1e-18
>seq955
Length=106330
Score = 109 bits (120), Expect = 1e-18
Identities = 268/406 (66%), Gaps = 3/406 (1%)
Strand=Plus/Plus
Query 249031 CAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGAC 249090
||||| ||| ||||| || | |||||| | |||||| |||| ||||| || |||
Sbjct 58727 CAGCTCTCCTCCTGCTTCCTCATCGCCATGAAGGACGACAGCATCGAGGGCATCTACGAC 58786
Query 249091 ACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCC 249150
||||| ||||| ||| || || |||| |||||||| ||||| | ||| |
Sbjct 58787 ACGCTCAAACATTGCGCGCTCATCTCCAAATCAGCGGGCGGTATCGGCGTTCACGTACAC 58846
Query 249151 AACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTA 249210
|||||| || ||||| || |||||| || || || || ||| | || |||||
Sbjct 58847 TGCATCCGCGCCAAGGGATCCTACATCGCCGGAACCAACGGCGTCTCCAACGGCCTCGTA 58906
Query 249211 CCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGA 249267
||| | || || || | | ||| || |||| | || |||| | |||| | |||
Sbjct 58907 CCCATGCTCCGCGTCTATAACAACACAGCTAGGTACGTCGACCAAGGCGGGAACAAACGA 58966
Query 249268 AAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGAC 249327
|| | ||||| | || | || ||||||||| |||||||| |||||| ||||
Sbjct 58967 CCCGGCGCCTTCGCGGTCTACCTCGAGCCGTGGCACGCGGATATATTTGAGTTCTTGGAT 59026
Query 249328 TTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGG 249387
| || || |||| || || ||| | | || | || || || || || || |||
Sbjct 59027 CTCAAGAAAAACACTGGGAAGGAGGAAGTTCGCGCAAGAGAGCTTTTTTATGGGCTCTGG 59086
Query 249388 GTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGA 249433
| | |||||||||||| | ||| || | ||||||| ||||
Sbjct 59087 ATACCAGACTTGTTCATGAAAAGAGTCGAGAGCAACGGCGAATGGA 59132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073411439336768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |