Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq754 178 1e-39
seq4530 86.0 5e-12
>seq754
Length=177731
Score = 178 bits (196), Expect = 1e-39
Identities = 631/979 (64%), Gaps = 19/979 (2%)
Strand=Plus/Plus
Query 35873 TTAGCAATCTGTCTGTAGTCGACCACGCCGTTTTCCCATGTACCCGTGATCGGTCCGACG 35932
|| || |||| ||||||||| || || || | | ||| || || ||| |||||
Sbjct 50627 TTCGCTATCTCTCTGTAGTCAACGACTCCATCCTGCCAAGTGCCTTTGACAGGTCCTGTA 50686
Query 35933 GCTACGCCACTGAATGGATTGTCACTGTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCG 35992
|| ||| |||| || || | | | |||| ||| || || ||||| || ||||||
Sbjct 50687 GCGTTCCCAGTGAAGGGGTTCTTGCCTTCATAGTCGTGAACTCCAGTCCATCCTCGGCCG 50746
Query 35993 TACATTGCTACGCCCAACACGAGtttttttGGATTCACTCGTTGCGCGAGCAAAGCGTCC 36052
||||| || || || | || | || || || || || | ||| ||||||| | |
Sbjct 50747 TACATAGCAACACCTACGACAATCTTCTTGGGGTTAACACCTTGAGCGAGCAGGAATTTC 50806
Query 36053 ACGGCCACGTTGGCGGTGTACGGTTCGTTAGGTTTCCACGCGGAACCGTACAGTGCCGTC 36112
|| | | | | |||||| | || || || ||||||| | | ||||||| | |||
Sbjct 50807 ACTCCAAAATCAGTGGTGTAAGTCTCCTTGGGCATCCACGCAGGAGCGTACAGAGATGTC 50866
Query 36113 TGATGACCGAGATCGGTAT---TAGACCAAGCTCCTTTGAAATCATAACTCATCACGAAA 36169
|| || ||||| ||||| ||||||| |||||||| || || || ||||||| |||
Sbjct 50867 TGGTGTCCGAG---GGTATCATTAGACCAGGCTCCTTTAAAGTCGTAGCTCATCAGGAAG 50923
Query 36170 ATTTTATCTAAATACTGTTGTGCTCGGTCGTAATTAACCGCGGCGATCTTGTCTATGCCA 36229
|| | || | |||| || || | ||| | ||| | ||||||||| ||
Sbjct 50924 ATATGGTCCATGTACTTCTGGGCAGCGCTGTAGTCGACCACTTGGATCTTGTCCCAACCG 50983
Query 36230 GCGCTAATCGCTGTGGTGAGTTCTAAAGTACGATTCGTTTGTATTTGA-ACTTGATCGAG 36288
|| || || || | || || || | | | |||| | || | | || |||
Sbjct 50984 GCACTGATGGCGGAAGTCAGCTCGTATTTCTTACCAGTTTC-AGCGGATAGCTCATTGAG 51042
Query 36289 CATGGCGCGCAATTCGCCCAATAAAGCGATATACGT-GTTATTGTCGCGTTCCACATCGC 36347
|||| | || | ||| || | | | |||| | || | || ||| || ||
Sbjct 51043 CATGTCACGTATTTCCTTCATGA----GTTCAACGTAGACATGGCCG---TCCTCAGGGC 51095
Query 36348 C---AACGTTTGGATTGGCGCCTTTGCCGCCCGGAAATTCCCAATCAATATCGATGCCGT 36404
| || || || ||||| |||||||| || || || |||||||| ||||| | || |
Sbjct 51096 CTCCAAGGTCAGGGTTGGCACCTTTGCCTCCAGGGAACTCCCAATCGATATCAACACCAT 51155
Query 36405 CGAAAAATTTCCATGTCAACACAAATTCACGCACGGATTCGACAAAAATTTGTCGCGTTC 36464
|||| |||||||| || || || || ||| ||| |||| ||| | || | |
Sbjct 51156 CGAAGAATTTCCAAGTTTGCAGGAAGTCTTTCACCGATGCGACGAAACGGTCTCTCTTGG 51215
Query 36465 GCGCATCGTGCATATGATAGAAGGGATCGGACAGTGTCCAACCGCCGATTGATGCCAACA 36524
| || | | | |||| ||||| | ||| ||||| || ||||| |||| | |
Sbjct 51216 TCTTGTCATTTAAGAAAAAGAATGGATCAGCCAGGGTCCAGCCACCGATGGATGGGAGGA 51275
Query 36525 CTTTTAGATTGGGATTGGCCAATTTTGCTGCCATTAATTGACCAAAATTGCCTTTGTAGG 36584
||| || | || || || ||| ||| | || || |||||||||||||| |
Sbjct 51276 TTTTCAGGTCAGGTTTCGCTTGTTTCAACATCATGAGCTGGCCGAAATTGCCTTTGTAAG 51335
Query 36585 GTTCGTTCCATGCGCTAACGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTGTA 36644
|||||||||| | | ||| | || ||||| || | || ||||| ||||| || |
Sbjct 51336 GTTCGTTCCAAGAAGACAGACCTTTCTGGGGTTTCTGCAAGGCTGCCCATGGATCATGGA 51395
Query 36645 TGGAAACTTTAAAATTGTCCCTGCCAGCGCACGATCTTTGCAACGCTTCAAAACTCCCCG 36704
| | ||||| || | || | ||| ||| || | ||||| |||| ||||| ||
Sbjct 51396 TTGTCACTTTGAAGTCCTCTCGGCCGCTGCAGGAACGTTGCAGAGCTTGGAAACTGCCTT 51455
Query 36705 TGATAGATTTTAAACTGTCGTTTATACCGTCACCGCCGCAAATCGGTATAAATCCGTATA 36764
||| || ||||||||||| || || ||||| |||||||| || || || ||||| |
Sbjct 51456 CGATCTCCTTCAAACTGTCGTTAATGCCATCACCTCCGCAAATTGGGATGAAACCGTACA 51515
Query 36765 AAATGTGCGAAAGGTTCGGCGTGGGCACTTTGTCCACGGGAAAAGATCGACCGTAAACGC 36824
| |||| || || || || | |||||| ||||| || ||| ||||
Sbjct 51516 GGAGATGCGTGAGATTTGGTACTGGGATACGGTCCACTGGAAACTTTCTGGGGTACACGC 51575
Query 36825 CCCATTCGACAAAATAGGC 36843
|||||||||| || || ||
Sbjct 51576 CCCATTCGACGAAGTAAGC 51594
>seq4530
Length=43051
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/229 (69%), Gaps = 1/229 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| || ||||| ||||| || ||||| || || || | || || ||| | |
Sbjct 12777 ATGCAGATCTTCGTTAAGACCTTGACTGGCAAGACCATCACACTTGAGGTTGAAGCTTCC 12718
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAG-AAGGCGTACCGGTTGACCA 24950
|| | | || | |||||| | ||| | | | | ||| ||||| | || |||||
Sbjct 12717 GATACCATTGAGAATGTTAAAGGCCAAAATCCAGGACAAGGAAGGCATCCCCCCAGACCA 12658
Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010
||| ||| | || | || || || ||||||||||| || || || ||||
Sbjct 12657 GCAGCGTCTTATCTTCGCCGGAAAGCAACTGGAAGACGGACGCACACTGTCGGACTACAA 12598
Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
||| ||||||||| | || ||||||||||| || || ||||||| |||
Sbjct 12597 CATTCAGAAAGAGTCGACCCTTCATTTAGTATTGCGTCTGCGCGGTGGT 12549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418172464437920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |