Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq955 192 5e-44
>seq955
Length=106330
Score = 192 bits (212), Expect = 5e-44
Identities = 1027/1614 (64%), Gaps = 50/1614 (3%)
Strand=Plus/Minus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
||||| ||||||| || | || | |||| ||| || |||| |||||||| ||||||
Sbjct 60345 TCAACAGTGAATTGGATCGCGTTCGCAGCCGGTTTCGTCCTCAGGTAATACATGCCAGTT 60286
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
|| | |||| | ||||| ||| ||| || || || | ||| | || | || | |
Sbjct 60285 TTCAAACCCATTTTCCATGCGTGAAAGTGAATTGATGTTAATTTACCATAGTTGGGTTCA 60226
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969
| | || || | | ||| || || || |||||||| || |||| || ||||||||
Sbjct 60225 GCCACATGAATGTTGAATGACTGGCTCTGGTCTATAAAAGCCCCTCGATCAGCTGCCAT- 60167
Query 36970 TCTAAAATACATTTTTGA--GATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027
|| || | |||| || |||||||| || || || || | || | |||| || |
Sbjct 60166 -CTGAATGCTCGTCTTGACTGAAATCTCCCAGACTGTCTTGTACAATTCTCTTAT-TTCT 60109
Query 37028 CTGGTAAA----TCTAAATGTTGAATAGAACCATTAT-GTAACACAATTGTATTCTTTAT 37082
||| || || | || ||| | ||| ||||| | || | | ||| || || ||
Sbjct 60108 TTGGGAATAGCTTCAATATTTTGGACAGATCCATTGTTGTGA-ATGATTAGGTTTTTCAT 60050
Query 37083 GTCATTATTCCACATATTTCTACTTATT-AGTTCTCTCAATAGGTGTGGATTTACAACCT 37141
|| | || ||||| | | | || | || |||| || || || | || || ||||
Sbjct 60049 ATCTTCATCCCACA-AGTCCGCCTCGGTCAGATCTCGCAGCAGATGATGGTTCACGACCT 59991
Query 37142 GAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACT 37201
| || || || || | || || | || || || ||| | || || | |||||
Sbjct 59990 GGAACTCGCCCGACAGGACCCTGCGCTGGTAGATGTTAGACGTAAAAGGCTCGAAGGACT 59931
Query 37202 CATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTAT 37261
| ||||| | | ||||| | || || || || ||||| ||||||| || || |
Sbjct 59930 CGTTATTGCCGAGGATTTGTGCGGTGGAGGCGGTGGGCATCGGTGCTAATAAGAGCGAGT 59871
Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTG 37321
||| | |||||| || ||| | | ||| || || ||| ||||||| ||||| |
Sbjct 59870 TTCGGAGACCATGTTTAGCGATTTTTTCTTTGAGAGCACCCCAGTCCCATAGGTCTGTGG 59811
Query 37322 GGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATG 37381
| | || |||||| || ||||| | || || | ||| | ||| | | || |
Sbjct 59810 GCGTTTTGTTCCACATGTCGTATTGCAAGATGCCCTGGCTCACCGGACAGCCCGGGTAAG 59751
Query 37382 TCTCATAAGGTCCGTAAATTTT---AGCTAGTTCGCAACTAGATTCTAGTGCGGCATAAT 37438
| |||||| || |||||| ||| || ||||| || | ||||| || |||| |
Sbjct 59750 TTTCATAAACGCC---AATTTTCTCAGCGAGCTCGCAGCTTGCTTCTAACGCACCATAGT 59694
Query 37439 ATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGC-ATAG 37497
| || ||||||||||| ||| ||| || | |||| |||| || || | | |||
Sbjct 59693 AAATGGTTTCGAAAATCTGTTGATTCAACTTGATTGCAGCTTCACTTTCATACGGGATA- 59635
Query 37498 CCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTC 37557
| || | | || |||| ||||| || ||||||||||| || || || | ||| |
Sbjct 59634 CGCATCAGGACGAAAGCATCGGCCAATCCTTGAACACCGATTCCGATCGGCCGATGCCGC 59575
Query 37558 TTATTAGA--TCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTA 37615
| || || ||| | | |||| | || || | || | ||||| ||||| ||||
Sbjct 59574 ATGTTTGAGTTCTTGGC--TTCTGGGATCGGGTAGAAGTTCACCTCTATGATTTTGTTTA 59517
Query 37616 GATTTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACATAAATACGTT----- 37670
|||| | || | ||||| || | | | | | ||| || || || ||||||
Sbjct 59516 GATTCTGCACGACGATTTTAGTGACTTCTTTTAGCTTCTCAAAGTTA--TACGTTTTGTC 59459
Query 37671 ATTATTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTT- 37729
|| ||| || ||| | ||| | | || | | |||||| || |||||||||||
Sbjct 59458 ATCATTGACGAATCTGTTCAGTGCGACGGACGCCAAATTACACACGGCAACTTCATCCGG 59399
Query 37730 ---CGT-TACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAA 37785
||| |||| || ||||| || ||||||||||| || | || || ||||
Sbjct 59398 CGACGTGTACTCAACG-----ATCTCCGTGCAGAGATTACTGCATTTGATAGTGCCCAGG 59344
Query 37786 TTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGT 37845
|| |||||||| ||| | || || | ||||| || || || || || || || |
Sbjct 59343 TTCTTTTGATTGCTTTTACTGTTGCATGCGTCTTTGTAAAGCATGTATGGGGTCCCGGTT 59284
Query 37846 TCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTA-At 37904
|| | ||| || || || |||| ||||| ||| ||||| | | | || | | ||
Sbjct 59283 TCGACTTGCGCTTCAATGATAGCCTTCCACAAA--ACTTGCGCTCTCACTTGCCTCACAT 59226
Query 37905 -ttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGC 37963
| ||||| | ||| ||| |||||| || | || || | |||||| |||
Sbjct 59225 ATCGTTTCTCTTGTTCATATCGCTCATATAACTTCTCGAACTCGTCCCCCCAGCAGTCGG 59166
Query 37964 ATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTT 38023
| || ||||| ||| || ||||| || |||||| | | | || || | ||
Sbjct 59165 CCAGGCCGGGACAGTCGTGGGGGCACATGAGGCTCCATTCGCCGTTGCTCTCGACTCTTT 59106
Query 38024 CCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGT 38083
||| || || || |||| ||| | || ||| | ||| | | | | ||| || |
Sbjct 59105 TCATGAACAAGTCTGGTATCCAGAGCCCATAAAAAAGCTCTCTTGCGCGAACTTCCTCCT 59046
Query 38084 TCCCTACATTCTTTCTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATA 38142
|||| | | |||||| || | | || || |||||||| |||||||| || || |
Sbjct 59045 TCCC-AGTGTTTTTCTTGAGATCCAAGAACTCAAATATATCCGCGTGCCACGGCTCGAGG 58987
Query 38143 TAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTA 38202
|| | || | || || |||| ||| | || || || | | || ||| |||||||
Sbjct 58986 TAGACCGCGAAGGCGCCGGGTCGTTTGTTCCCGCCTTGGTCGACGTACCTAGCTGTGTTG 58927
Query 38203 TTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAA 38262
||||| | | | ||| ||||| | || || || |||||| | |||| || ||
Sbjct 58926 TTATAGACGCGGAGCATGGGTACGAGGCCGTTGGAGACGCCGTTGGTTCCGGCGATGTAG 58867
Query 38263 GTACCCTTAGCTCGTATATTACTTATCGACAA-TCCTATTCCACCTGCATGTTTTGATAT 38321
| ||||| || || || | | || || || || || || || ||| || ||
Sbjct 58866 GATCCCTTGGCGCGGAT-GCAGTGTACGTGAACGCCGATACCGCCCGCTGATTTGGAGAT 58808
Query 38322 TAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTAT 38375
| ||||| ||||| | ||| || | || || || || ||||| ||||| ||
Sbjct 58807 GAGCGCGCAATGTTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCAT 58754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468373694895440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |